Mutant Information 

Mutant NameFN-25  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 8

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr128566540A-THomoINTERGENIC
SBS  Chr410792584C-THomoSYNONYMOUS_CODING
SBS  Chr431304024G-AHomoSYNONYMOUS_CODING
SBS  Chr815629369T-AHomoINTERGENIC
SBS  Chr817619796A-GHomoINTERGENIC
SBS  Chr820593008T-CHomoINTRON
SBS  Chr97364849T-CHomoINTERGENIC
SBS  Chr98509115T-AHomoINTERGENIC

Deletions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr129273209292732101LOC_Os01g50940
Deletion  Chr123722001237280006000LOC_Os01g41870
Deletion  Chr1022348579223485834
Deletion  Chr10183680921836811321
Deletion  Chr1118074235180742361
Deletion  Chr1125969320259693299
Deletion  Chr1125185311251853121
Deletion  Chr1116013711160137198LOC_Os11g27810
Deletion  Chr118779533877954310
Deletion  Chr11602739860309393541LOC_Os11g10920
Deletion  Chr325085761250857643
Deletion  Chr418771391187713932
Deletion  Chr4175936117593632LOC_Os04g03860
Deletion  Chr4232241262322413711
Deletion  Chr6879110887911091
Deletion  Chr621564047215640547LOC_Os06g36680
Deletion  Chr725424652254246531
Deletion  Chr7415448541544894
Deletion  Chr712859410128594199
Deletion  Chr8857249685725048
Deletion  Chr8300930230093042

Insertions: 7

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr330882012308820121
Insertion  Chr431913823319138231
Insertion  Chr5408529540852951
Insertion  Chr527863457278634574
Insertion  Chr6292258629225861
Insertion  Chr719030465190304652
Insertion  Chr725872667258726671

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1185601468644330LOC_Os11g15290