Mutant Information 

Mutant NameFN-257  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 27

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19186796C-THETINTERGENIC
SBS  Chr132216903T-AHETINTERGENIC
SBS  Chr124500602G-AHETINTRON
SBS  Chr122257673C-THETSYNONYMOUS_CODING
SBS  Chr115043653C-GHOMONON_SYNONYMOUS_CODINGLOC_Os01g27000
SBS  Chr19535255C-THOMONON_SYNONYMOUS_CODINGLOC_Os01g16780
SBS  Chr1224773504T-GHOMOINTERGENIC
SBS  Chr1218848325A-GHETINTERGENIC
SBS  Chr1214163548A-GHETINTERGENIC
SBS  Chr1226900489C-THOMOINTERGENIC
SBS  Chr335863362C-THETNON_SYNONYMOUS_CODINGLOC_Os03g63480
SBS  Chr316011672G-THETINTRON
SBS  Chr318966160C-GHETNON_SYNONYMOUS_CODINGLOC_Os03g33160
SBS  Chr319452706C-THETSYNONYMOUS_CODING
SBS  Chr49221395C-THETINTERGENIC
SBS  Chr424150247A-GHOMOINTERGENIC
SBS  Chr435460686A-THOMOINTERGENIC
SBS  Chr58342190C-AHETINTERGENIC
SBS  Chr629353189T-GHETINTRON
SBS  Chr617931790C-THETINTERGENIC
SBS  Chr613737072C-GHETINTERGENIC
SBS  Chr61899335G-AHETINTERGENIC
SBS  Chr72869208A-GHOMOINTERGENIC
SBS  Chr75060176A-THOMOINTERGENIC
SBS  Chr717023233T-CHOMOINTERGENIC
SBS  Chr71860528C-GHOMONON_SYNONYMOUS_CODINGLOC_Os07g04230
SBS  Chr813627985T-CHOMOINTRON

Deletions: 26

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr10207759842077599612
Deletion  Chr10181406831814070320
Deletion  Chr10700894870089491
Deletion  Chr12241209652412098419LOC_Os12g39180
Deletion  Chr299240939950870267773
Deletion  Chr233774001338300005600013
Deletion  Chr210369151103691587
Deletion  Chr235901995359020005LOC_Os02g58770
Deletion  Chr3895611989561212
Deletion  Chr422311314223113217
Deletion  Chr47255123725514926LOC_Os04g13150
Deletion  Chr511041001111010006000010
Deletion  Chr5220652342206526733
Deletion  Chr5111260011157000044400064
Deletion  Chr5115940011207400048000066
Deletion  Chr5831374583137461
Deletion  Chr6430619543062005
Deletion  Chr6103218710321881
Deletion  Chr687380687381812LOC_Os06g02520
Deletion  Chr6240290424029051
Deletion  Chr71676396916764480511LOC_Os07g28640
Deletion  Chr717539680175422492569
Deletion  Chr722209303222093085
Deletion  Chr713058860130588611
Deletion  Chr9750385875038591
Deletion  Chr922834486228344871LOC_Os09g39820

Insertions: 7

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr21139661139661
Insertion  Chr212473740124737401
Insertion  Chr231208764312087641
Insertion  Chr417697396176973961
Insertion  Chr5480909948090993
Insertion  Chr525961542259615421
Insertion  Chr627018392270183921

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr511331700Chr14670915
Translocation  Chr716763981Chr511327969LOC_Os07g28640
Translocation  Chr716764476Chr14670922LOC_Os07g28640