Mutant Information 

Mutant NameFN-258  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 25

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr136810742G-CHOMOINTERGENIC
SBS  Chr10723145T-AHETINTERGENIC
SBS  Chr1012427593A-GHOMOINTERGENIC
SBS  Chr1013712434A-THETINTRON
SBS  Chr117613677T-CHETINTERGENIC
SBS  Chr117893420A-THETINTERGENIC
SBS  Chr1113933971T-CHETINTERGENIC
SBS  Chr1118038040G-AHETSYNONYMOUS_CODING
SBS  Chr1118102220G-CHETNON_SYNONYMOUS_CODINGLOC_Os11g31100
SBS  Chr1221000848T-CHETINTERGENIC
SBS  Chr215590579G-AHETINTERGENIC
SBS  Chr232579613T-CHETINTRON
SBS  Chr41865781C-GHOMOINTERGENIC
SBS  Chr42374167G-AHOMOINTERGENIC
SBS  Chr42733272G-CHETNON_SYNONYMOUS_CODINGLOC_Os04g05430
SBS  Chr435003253G-AHETINTERGENIC
SBS  Chr63089527A-GHETINTERGENIC
SBS  Chr625724966G-AHETINTERGENIC
SBS  Chr610722305A-GHOMOINTERGENIC
SBS  Chr71170429C-THETINTERGENIC
SBS  Chr87779082C-THETINTERGENIC
SBS  Chr920526973G-AHETINTERGENIC
SBS  Chr918264549G-AHETNON_SYNONYMOUS_CODINGLOC_Os09g30020
SBS  Chr918264546C-AHETNON_SYNONYMOUS_CODINGLOC_Os09g30020
SBS  Chr914242011C-THETINTRON

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1288943292889434213LOC_Os01g50340
Deletion  Chr18495027849503811
Deletion  Chr124168704241702271523LOC_Os01g42510
Deletion  Chr1369904193699045031
Deletion  Chr112736825127368272
Deletion  Chr1264748126474821
Deletion  Chr1219411897194119047
Deletion  Chr121516741516795
Deletion  Chr12161736516173661
Deletion  Chr2217622942176230511
Deletion  Chr334226752342267553
Deletion  Chr3808824380882441LOC_Os03g14840
Deletion  Chr3300651703006520131
Deletion  Chr5138984601389847414
Deletion  Chr52846000128479000190005
Deletion  Chr6148679481486795810
Deletion  Chr614728046147280471
Deletion  Chr729384006293840071LOC_Os07g49080
Deletion  Chr7193766019376611
Deletion  Chr715715577157155781
Deletion  Chr8267442342674426632
Deletion  Chr91256810712568356249LOC_Os09g20880

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr123170448231704481
Insertion  Chr5530044353004431

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr111622051216225739LOC_Os11g28210

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1116220505Chr1241702072
Translocation  Chr1116225736Chr124168719LOC_Os01g42510