Mutant Information 

Mutant NameFN-259  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 22

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr16371246A-THETINTERGENIC
SBS  Chr17297256T-AHETINTERGENIC
SBS  Chr19664634A-GHETINTERGENIC
SBS  Chr113687536T-GHETINTRON
SBS  Chr138783442T-CHETNON_SYNONYMOUS_CODINGLOC_Os01g66790
SBS  Chr1016292125G-AHETINTERGENIC
SBS  Chr1110691514G-THOMOINTERGENIC
SBS  Chr1116821229G-CHETINTERGENIC
SBS  Chr429740187C-THETNON_SYNONYMOUS_CODINGLOC_Os04g49880
SBS  Chr518341222C-GHETINTERGENIC
SBS  Chr56894220T-CHETINTERGENIC
SBS  Chr510337385G-AHETNON_SYNONYMOUS_CODINGLOC_Os05g17990
SBS  Chr615019821T-AHETINTERGENIC
SBS  Chr629036691A-GHOMOINTRON
SBS  Chr615019820G-AHETINTERGENIC
SBS  Chr66394367G-AHETINTERGENIC
SBS  Chr723596345G-AHETUTR_3_PRIME
SBS  Chr85799050A-GHETINTERGENIC
SBS  Chr88314448A-CHOMOINTERGENIC
SBS  Chr818162779T-CHOMOINTERGENIC
SBS  Chr86466958T-AHETNON_SYNONYMOUS_CODINGLOC_Os08g10970
SBS  Chr914706133A-THETINTERGENIC

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr131404183314041896
Deletion  Chr13592100135941000200004
Deletion  Chr10111973471119738134LOC_Os10g21810
Deletion  Chr221879799218798023
Deletion  Chr2177672001776724040
Deletion  Chr3485671748567181
Deletion  Chr311926873119268763
Deletion  Chr3157091031570914643
Deletion  Chr4108722861087229812LOC_Os04g19520
Deletion  Chr4205103112051035544
Deletion  Chr525503409255034167
Deletion  Chr5616842761684281
Deletion  Chr5103463831034639916
Deletion  Chr7176827731768279623
Deletion  Chr713299144132991451LOC_Os07g23540
Deletion  Chr8101385241013853713
Deletion  Chr81194621119463110LOC_Os08g02840
Deletion  Chr8227114862271150519LOC_Os08g36030
Deletion  Chr9676591967659212

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1220050528200505281
Insertion  Chr235629948356299481

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr41338513713501528LOC_Os04g23410
Inversion  Chr41344370413501486

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1217425544Chr114585433