Mutant Information 

Mutant NameFN-261  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 17

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr114540790A-GHETINTRON
SBS  Chr132993293G-AHETINTRON
SBS  Chr1016527069T-GHETINTERGENIC
SBS  Chr105102955G-THETNON_SYNONYMOUS_CODINGLOC_Os10g09460
SBS  Chr1122441166G-AHOMOINTERGENIC
SBS  Chr128887121C-AHOMOINTERGENIC
SBS  Chr128445715T-GHOMOINTERGENIC
SBS  Chr1217720202G-AHOMOSYNONYMOUS_CODING
SBS  Chr313998840G-AHETINTERGENIC
SBS  Chr435076283C-THETINTERGENIC
SBS  Chr520590947A-CHETUTR_3_PRIME
SBS  Chr515727618G-AHETSYNONYMOUS_CODING
SBS  Chr57935245A-THETINTRON
SBS  Chr615066808A-GHOMOINTRON
SBS  Chr628591158A-THETINTERGENIC
SBS  Chr7642045G-AHETINTERGENIC
SBS  Chr86695743C-THETNON_SYNONYMOUS_CODINGLOC_Os08g11410

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1179349817935079
Deletion  Chr121572602215726119
Deletion  Chr1946695394669618
Deletion  Chr10123660011266400029800049
Deletion  Chr11105906601059068222LOC_Os11g18700
Deletion  Chr1215990389159903901
Deletion  Chr25659989566000314
Deletion  Chr214828626148286315
Deletion  Chr4521304552130461
Deletion  Chr624531398245314024
Deletion  Chr627263835272638405
Deletion  Chr713244465132444683
Deletion  Chr7873585987358634
Deletion  Chr719396997193970058
Deletion  Chr7134060201340605939LOC_Os07g23740
Deletion  Chr720510685205106883
Deletion  Chr827630345276303483
Deletion  Chr8136009841360099511
Deletion  Chr9489853148985321

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr513602349136023491
Insertion  Chr818402092184020921
Insertion  Chr819998614199986141

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr658719056254723LOC_Os06g11190
Inversion  Chr658719276254732LOC_Os06g11190

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr46201161Chr27066370
Translocation  Chr46203019Chr27066375