Mutant Information 

Mutant NameFN-264  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 25

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr18227491T-AHETINTERGENIC
SBS  Chr18227492T-AHETINTERGENIC
SBS  Chr18227501G-AHETINTERGENIC
SBS  Chr129689314A-GHOMONON_SYNONYMOUS_CODINGLOC_Os01g51650
SBS  Chr133926793G-AHOMOINTRON
SBS  Chr137481979C-THOMOINTERGENIC
SBS  Chr1117942396T-GHETINTERGENIC
SBS  Chr122898276T-AHETINTERGENIC
SBS  Chr1217045248G-AHETNON_SYNONYMOUS_CODINGLOC_Os12g28830
SBS  Chr232873127C-THOMOINTERGENIC
SBS  Chr213132432T-AHETUTR_3_PRIME
SBS  Chr224155788C-THOMONON_SYNONYMOUS_CODINGLOC_Os02g39940
SBS  Chr232873126C-THOMOINTERGENIC
SBS  Chr313509739C-THETINTRON
SBS  Chr335925989A-THOMOINTERGENIC
SBS  Chr313509740C-THETINTRON
SBS  Chr36941240C-THETINTRON
SBS  Chr311843735T-CHETINTERGENIC
SBS  Chr48806637G-AHETSYNONYMOUS_CODING
SBS  Chr410645178G-AHETINTRON
SBS  Chr516180427C-AHOMOINTERGENIC
SBS  Chr528553155T-CHETNON_SYNONYMOUS_CODINGLOC_Os05g49770
SBS  Chr528553148T-AHETSYNONYMOUS_CODING
SBS  Chr624160692G-AHETINTERGENIC
SBS  Chr811648322G-CHETINTERGENIC

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr135962038359620446
Deletion  Chr118140211181402121
Deletion  Chr129085365290853727LOC_Os01g50640
Deletion  Chr10161413461614136317
Deletion  Chr10128806911288072029
Deletion  Chr12256143922561440210
Deletion  Chr12813155181315521
Deletion  Chr1212944355129443572
Deletion  Chr2441009844101057
Deletion  Chr2105696231056965431LOC_Os02g18200
Deletion  Chr324543406245434115
Deletion  Chr3287269532872698835
Deletion  Chr4636223763622381LOC_Os04g11620
Deletion  Chr52728900127312000230004
Deletion  Chr5902849790284981LOC_Os05g15990
Deletion  Chr725717942257179486LOC_Os07g42940
Deletion  Chr820452783204538661083
Deletion  Chr9223815002238153434LOC_Os09g38970

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr12182826051828260527
Insertion  Chr724313236243132362
Insertion  Chr8203156182031561810
Insertion  Chr824146003241460032

Inversions: 8

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11310540013599906LOC_Os01g23330
Inversion  Chr1074072088062220LOC_Os10g15180
Inversion  Chr1074072478062224LOC_Os10g15180
Inversion  Chr101831052718385511LOC_Os10g34340
Inversion  Chr1214088662703879LOC_Os12g03540
Inversion  Chr1214088792704003LOC_Os12g03540
Inversion  Chr217756472167250LOC_Os02g04080
Inversion  Chr217756962167128LOC_Os02g04080

Translocations: 7

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr98941257Chr130237200
Translocation  Chr1011187080Chr825365005LOC_Os10g21800
Translocation  Chr914377088Chr232007612
Translocation  Chr915262229Chr77408638LOC_Os07g12900
Translocation  Chr1217347096Chr82691560
Translocation  Chr821877960Chr229879229LOC_Os02g48830
Translocation  Chr723015057Chr323476830LOC_Os07g38310