Mutant Information 

Mutant NameFN-27  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 2

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr105621424C-THomoINTRON
SBS  Chr75927618T-GHomoINTERGENIC

Deletions: 20

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1410642684106430032
Deletion  Chr1020395138203951435LOC_Os10g38090
Deletion  Chr1116669642166696431
Deletion  Chr1117055151170551521
Deletion  Chr1211302870113028722
Deletion  Chr12122604761226048812LOC_Os12g21784
Deletion  Chr332142039321420434
Deletion  Chr3303428153034282611
Deletion  Chr3287761972877621013
Deletion  Chr425612225256148142589LOC_Os04g43300
Deletion  Chr4252950012540000010500019
Deletion  Chr527928703279287074
Deletion  Chr61390011790004000011
Deletion  Chr627288677272886792
Deletion  Chr6193899019389999LOC_Os06g04520
Deletion  Chr825329001253960006700015
Deletion  Chr8463384146338454LOC_Os08g08140
Deletion  Chr8261422732614229724LOC_Os08g41390
Deletion  Chr916811752168117531
Deletion  Chr9120323741203243157

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1019526014195260141
Insertion  Chr273997739971
Insertion  Chr233915860339158601
Insertion  Chr611552931115529311LOC_Os06g20140

Inversions: 6

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr2256140114315772
Inversion  Chr22779039929195322LOC_Os02g45680
Inversion  Chr22779039929195322LOC_Os02g47744
Inversion  Chr42529607629480891LOC_Os04g49394
Inversion  Chr82509165125328850LOC_Os08g39630
Inversion  Chr82509165125328850LOC_Os08g39980