Mutant Information 

Mutant NameFN-272  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr113308103T-GHOMOINTERGENIC
SBS  Chr123106130A-GHOMOUTR_3_PRIME
SBS  Chr129401526G-CHOMOINTERGENIC
SBS  Chr133907505A-THETINTRON
SBS  Chr1015235987C-THETINTERGENIC
SBS  Chr118901336G-AHOMOINTERGENIC
SBS  Chr1213992112A-THETINTRON
SBS  Chr1218146865G-CHETNON_SYNONYMOUS_CODINGLOC_Os12g30240
SBS  Chr2294985A-THETINTERGENIC
SBS  Chr33868971A-GHOMOINTRON
SBS  Chr315500138T-CHETINTERGENIC
SBS  Chr316106576T-CHETINTRON
SBS  Chr41787471C-THETINTERGENIC
SBS  Chr416747233C-THETINTERGENIC
SBS  Chr423338071G-THETINTERGENIC
SBS  Chr523848882T-CHETINTRON
SBS  Chr54025239G-THETINTERGENIC
SBS  Chr518985889T-GHETINTERGENIC
SBS  Chr512453474G-THETUTR_5_PRIME
SBS  Chr512453475C-THETUTR_5_PRIME
SBS  Chr610824270A-THOMOINTERGENIC
SBS  Chr627233715A-GHOMOINTERGENIC
SBS  Chr77380734T-CHETINTERGENIC
SBS  Chr711195557C-AHETSTOP_GAINEDLOC_Os07g18890
SBS  Chr75490354C-THETINTERGENIC
SBS  Chr811359339A-THETINTERGENIC
SBS  Chr82596687C-THOMOINTERGENIC
SBS  Chr819544909G-THETINTERGENIC
SBS  Chr97260586T-CHOMOINTERGENIC
SBS  Chr921424037G-AHOMOINTERGENIC

Deletions: 23

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1294015382940155618
Deletion  Chr126695735266969911256
Deletion  Chr132211961322119709
Deletion  Chr115748161157481632
Deletion  Chr126316323263163241
Deletion  Chr1122062764220627662
Deletion  Chr1119069264190692662LOC_Os11g32270
Deletion  Chr11203817332038174411
Deletion  Chr12247994292479943910
Deletion  Chr12574702057470233
Deletion  Chr1223166203231662052
Deletion  Chr1225358507253585125LOC_Os12g40950
Deletion  Chr1214032807140328092
Deletion  Chr234207685342076861
Deletion  Chr2152826791528998673072
Deletion  Chr2314570431457062
Deletion  Chr31555965615592983333275
Deletion  Chr31556000115595000350005
Deletion  Chr4348973413489735211
Deletion  Chr413298563132985707LOC_Os04g23300
Deletion  Chr525529711255297198
Deletion  Chr5750774975077501
Deletion  Chr920104233201042363

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1021857128218571284
Insertion  Chr11254392782543927810
Insertion  Chr524432561244325611
Insertion  Chr622279922222799222
Insertion  Chr810173562101735622

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr128131943236813LOC_Os01g05870
Inversion  Chr128131943236813LOC_Os01g06820
Inversion  Chr128173093236815LOC_Os01g06820
Inversion  Chr4891417810714310
Inversion  Chr72578631425924846

Translocations: 8

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr101823402Chr134016398
Translocation  Chr32570542Chr18218342
Translocation  Chr64016030Chr520684292LOC_Os06g08290
Translocation  Chr65418386Chr13236815LOC_Os01g06820
Translocation  Chr811601887Chr461845
Translocation  Chr1111660577Chr67698481LOC_Os06g13860
Translocation  Chr514831585Chr317596459
Translocation  Chr817211283Chr331169792