Mutant Information 

Mutant NameFN-273  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 28

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19146398A-CHOMOINTERGENIC
SBS  Chr139244488C-GHETSTART_GAINEDLOC_Os01g67520
SBS  Chr137601663T-AHETINTERGENIC
SBS  Chr135527085C-THETSYNONYMOUS_CODING
SBS  Chr124185770G-AHETINTERGENIC
SBS  Chr119821271C-THETINTERGENIC
SBS  Chr104934277C-AHOMOINTERGENIC
SBS  Chr1011334327G-AHOMOINTRON
SBS  Chr109266016A-GHOMOINTERGENIC
SBS  Chr11241126A-THOMONON_SYNONYMOUS_CODINGLOC_Os11g01380
SBS  Chr123252200C-THETSYNONYMOUS_CODING
SBS  Chr1223672100A-GHOMOINTRON
SBS  Chr28709431G-AHETINTERGENIC
SBS  Chr311591995G-AHETINTERGENIC
SBS  Chr420921635A-THETINTERGENIC
SBS  Chr426753578A-THOMOINTRON
SBS  Chr512183830T-AHETINTERGENIC
SBS  Chr66873852C-AHETINTERGENIC
SBS  Chr78184155C-THETINTERGENIC
SBS  Chr721458058A-THETNON_SYNONYMOUS_CODINGLOC_Os07g35840
SBS  Chr725007194A-THETINTERGENIC
SBS  Chr723116902G-AHETNON_SYNONYMOUS_CODINGLOC_Os07g38490
SBS  Chr720858481G-AHETINTERGENIC
SBS  Chr813668908A-GHOMOINTRON
SBS  Chr83348538T-GHETINTERGENIC
SBS  Chr92930964G-AHETINTERGENIC
SBS  Chr916842752G-AHETINTERGENIC
SBS  Chr910046206G-AHETNON_SYNONYMOUS_CODINGLOC_Os09g16430

Deletions: 26

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1390639663917000910604315
Deletion  Chr111766550117665533
Deletion  Chr115129660151296655
Deletion  Chr11179081631790820340
Deletion  Chr1112594575125945761
Deletion  Chr12153392441533926925
Deletion  Chr122041502204151412
Deletion  Chr226239410262394199
Deletion  Chr229629855296298616
Deletion  Chr228675614286756151
Deletion  Chr228675678286756791
Deletion  Chr35173482531302013953840
Deletion  Chr3166120571661208528
Deletion  Chr3243939342487419348025955
Deletion  Chr328661239286612423
Deletion  Chr316280426162804348LOC_Os03g28289
Deletion  Chr34849267484928417
Deletion  Chr433536195335361994
Deletion  Chr516471938164719446LOC_Os05g28170
Deletion  Chr516246063162460685
Deletion  Chr66739886739902
Deletion  Chr6199607221996073192
Deletion  Chr824439253244413172064
Deletion  Chr821846652218466597LOC_Os08g34750
Deletion  Chr896867349711829250957
Deletion  Chr9223959532239599946

Insertions: 9

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1705223970522392
Insertion  Chr219293462192934622
Insertion  Chr228012238280122382
Insertion  Chr3439008043900801
Insertion  Chr430178775301787751
Insertion  Chr432487617324876172
Insertion  Chr5640228764022874
Insertion  Chr810678210106782102
Insertion  Chr824124414241244142

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr3182916916200536

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr73953164Chr324874187LOC_Os07g07880
Translocation  Chr73953187Chr324393948LOC_Os07g07880
Translocation  Chr727716784Chr35313016LOC_Os07g46450
Translocation  Chr727716790Chr35173644LOC_Os07g46450