Mutant Information 

Mutant NameFN-275  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 25

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr124948092G-AHOMOINTERGENIC
SBS  Chr124948094G-THOMOINTERGENIC
SBS  Chr103002682A-CHETINTERGENIC
SBS  Chr118501809G-AHETINTERGENIC
SBS  Chr118155086A-CHETNON_SYNONYMOUS_CODINGLOC_Os11g14520
SBS  Chr111117111T-CHETINTERGENIC
SBS  Chr128270532T-AHETINTERGENIC
SBS  Chr123384062G-AHETINTERGENIC
SBS  Chr1217029000G-AHOMOINTERGENIC
SBS  Chr229616819A-GHETINTERGENIC
SBS  Chr28434185A-THOMOINTRON
SBS  Chr323825676A-GHETINTERGENIC
SBS  Chr414121693T-AHOMONON_SYNONYMOUS_CODINGLOC_Os04g24590
SBS  Chr413755037C-THOMOINTERGENIC
SBS  Chr434499168C-THOMOSYNONYMOUS_CODING
SBS  Chr435246995G-AHETINTERGENIC
SBS  Chr522463770C-GHETINTERGENIC
SBS  Chr52899947T-CHOMOINTERGENIC
SBS  Chr614951068A-GHETINTERGENIC
SBS  Chr714221291C-THOMOINTERGENIC
SBS  Chr726077487T-AHETINTERGENIC
SBS  Chr716371935C-THOMOINTERGENIC
SBS  Chr8822938A-THETINTERGENIC
SBS  Chr913418448A-GHETINTERGENIC
SBS  Chr918735551T-AHETINTRON

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr124183919241839278LOC_Os01g42520
Deletion  Chr1118501301185016535
Deletion  Chr112880507128805136LOC_Os01g22910
Deletion  Chr10184931711849318413
Deletion  Chr1014290023142900274
Deletion  Chr1114319702143197031
Deletion  Chr11631839963184045LOC_Os11g11380
Deletion  Chr11968021696802193LOC_Os11g17370
Deletion  Chr11218224162182243216
Deletion  Chr125609165609204
Deletion  Chr3953543395354352
Deletion  Chr3158101315810207
Deletion  Chr31774568217745839157LOC_Os03g31170
Deletion  Chr317595630175956333
Deletion  Chr43494180334941922119
Deletion  Chr5664107466410773
Deletion  Chr9683914468391451
Deletion  Chr920521180205211866
Deletion  Chr96451009645102516

Insertions: 8

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr140840114408401143
Insertion  Chr1119118308191183082
Insertion  Chr1122168333221683332
Insertion  Chr5546230054623002
Insertion  Chr516375533163755332
Insertion  Chr711319117113191172
Insertion  Chr8299427029942702
Insertion  Chr824023471240234713

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr4158969220963874LOC_Os04g34650

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr44247524Chr325764671LOC_Os04g07980
Translocation  Chr98901569Chr1118067682
Translocation  Chr129499670Chr1019652790
Translocation  Chr1016766288Chr95562755