Mutant Information 

Mutant NameFN-284  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 20

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr103230269C-THETSYNONYMOUS_CODING
SBS  Chr1111500907C-THOMOINTERGENIC
SBS  Chr1213734501G-THETINTERGENIC
SBS  Chr210718357T-CHETINTERGENIC
SBS  Chr216574387G-AHOMOINTERGENIC
SBS  Chr218662985C-GHOMOINTERGENIC
SBS  Chr229368572G-CHETINTERGENIC
SBS  Chr34873071G-THOMOINTERGENIC
SBS  Chr34873072G-THOMOINTERGENIC
SBS  Chr313374013G-CHETINTERGENIC
SBS  Chr529286749A-CHETUTR_5_PRIME
SBS  Chr526663034A-THETINTERGENIC
SBS  Chr526663033C-THETINTERGENIC
SBS  Chr516883429T-CHETINTERGENIC
SBS  Chr616322937A-CHETNON_SYNONYMOUS_CODINGLOC_Os06g28660
SBS  Chr716536956A-THETINTERGENIC
SBS  Chr822725266A-GHETINTERGENIC
SBS  Chr919572444A-THETNON_SYNONYMOUS_CODINGLOC_Os09g32820
SBS  Chr919941348G-AHETINTERGENIC
SBS  Chr922652097T-GHETINTERGENIC

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1419410641941148
Deletion  Chr1148835441488356016
Deletion  Chr12414037441403828
Deletion  Chr12812165881216635LOC_Os12g14270
Deletion  Chr229888715298887161
Deletion  Chr4244180924418101
Deletion  Chr4129962612996326LOC_Os04g03120
Deletion  Chr4225107482251077729
Deletion  Chr513190564131905695
Deletion  Chr526339971263399732
Deletion  Chr517359483173594874
Deletion  Chr513190568131905735
Deletion  Chr5276260012763700011000LOC_Os05g48200
Deletion  Chr6204480012056500011700015
Deletion  Chr717019366170193704
Deletion  Chr7170183761701839620
Deletion  Chr775040668147914643848108
Deletion  Chr89146249146251
Deletion  Chr821215211212152209

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr218219646182196469LOC_Os02g30610
Insertion  Chr9786173778617372

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr121338014520669130
Inversion  Chr21279618213360333LOC_Os02g22370
Inversion  Chr21279619713360343LOC_Os02g22370
Inversion  Chr21362674513703684
Inversion  Chr3942800524348546LOC_Os03g43580

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr64196609Chr111494122
Translocation  Chr95559373Chr156899272
Translocation  Chr812109570Chr29635651
Translocation  Chr821850189Chr346949922