Mutant Information 

Mutant NameFN-29  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 6

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19908463C-THomoINTERGENIC
SBS  Chr122243358A-THomoINTERGENIC
SBS  Chr1227195886A-GHomoINTERGENIC
SBS  Chr234461224C-AHomoINTERGENIC
SBS  Chr629200626A-CHomoINTERGENIC
SBS  Chr822313713C-GHomoNON_SYNONYMOUS_CODINGLOC_Os08g35390

Deletions: 15

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr10184524651845247914LOC_Os10g34614
Deletion  Chr11802910080291044
Deletion  Chr2576323577224901LOC_Os02g02050
Deletion  Chr3537294653729504
Deletion  Chr34560572456058210
Deletion  Chr35697553569757118
Deletion  Chr4155229681552297810LOC_Os04g26610
Deletion  Chr4164010011650500010400017
Deletion  Chr4130278151302782510
Deletion  Chr518194204181942128
Deletion  Chr519078408190784102
Deletion  Chr630980801309808032LOC_Os06g51200
Deletion  Chr6808611080861177
Deletion  Chr911413032114130331
Deletion  Chr921358818213588191

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1015808107158081071
Insertion  Chr1122223380222233804
Insertion  Chr217454917174549172LOC_Os02g29380
Insertion  Chr915985036159850361

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr122347144423496604LOC_Os12g38210
Inversion  Chr122347144423496604LOC_Os12g38260
Inversion  Chr41620785416266457LOC_Os04g27420
Inversion  Chr71771629717788256LOC_Os07g30150

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr88660496Chr2577225LOC_Os02g02050
Translocation  Chr88660509Chr2576337LOC_Os02g02050