Mutant Information 

Mutant NameFN-290  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 32

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr111242848G-AHOMOINTERGENIC
SBS  Chr114618445C-AHETINTERGENIC
SBS  Chr136926814C-THETINTERGENIC
SBS  Chr138204143A-CHETINTERGENIC
SBS  Chr1125165647C-THETINTERGENIC
SBS  Chr1115340981G-AHETINTERGENIC
SBS  Chr1224696565G-CHOMOINTERGENIC
SBS  Chr125511171G-THETINTRON
SBS  Chr1225736482G-CHETINTERGENIC
SBS  Chr234553784C-GHETINTERGENIC
SBS  Chr227250184T-AHOMOUTR_3_PRIME
SBS  Chr210564645G-THOMOINTERGENIC
SBS  Chr24811068C-GHOMOINTRON
SBS  Chr232005638T-CHETINTERGENIC
SBS  Chr228850949A-GHOMOINTERGENIC
SBS  Chr322537409C-GHETINTERGENIC
SBS  Chr316739583C-THETINTERGENIC
SBS  Chr36578024A-GHETINTRON
SBS  Chr35230178T-AHETINTERGENIC
SBS  Chr48845046G-AHETINTERGENIC
SBS  Chr415375698T-GHETINTERGENIC
SBS  Chr5296785C-GHETNON_SYNONYMOUS_CODINGLOC_Os05g01500
SBS  Chr515602732G-THETINTERGENIC
SBS  Chr515602733T-GHETINTERGENIC
SBS  Chr515602735G-THETINTERGENIC
SBS  Chr528825478C-THETINTERGENIC
SBS  Chr72573155G-AHETINTERGENIC
SBS  Chr812549010C-GHETNON_SYNONYMOUS_CODINGLOC_Os08g20952
SBS  Chr89479711G-THETINTRON
SBS  Chr88400718C-THETINTERGENIC
SBS  Chr86331188C-GHETNON_SYNONYMOUS_CODINGLOC_Os08g10770
SBS  Chr813595264C-THETINTERGENIC

Deletions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1420200014224400022400032
Deletion  Chr1160245521602457725
Deletion  Chr11557083955708412LOC_Os11g10260
Deletion  Chr1113200163132001718LOC_Os11g22960
Deletion  Chr11234166602341667313LOC_Os11g39330
Deletion  Chr1217832852178328531
Deletion  Chr12259403932594042532
Deletion  Chr25871255871316
Deletion  Chr230024628300246313
Deletion  Chr231281158312811602LOC_Os02g51119
Deletion  Chr231333575313335783LOC_Os02g51200
Deletion  Chr3317090013172400015000LOC_Os03g55704
Deletion  Chr3211840012143200024800043
Deletion  Chr332064134320641362
Deletion  Chr5126299612629971
Deletion  Chr5371740637174093
Deletion  Chr6295724129572432LOC_Os06g06350
Deletion  Chr727009775270097772
Deletion  Chr723806402238064119
Deletion  Chr8839627683962815
Deletion  Chr9271414327141441

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1271365327136532
Insertion  Chr137654897376548972
Insertion  Chr330016613300166131
Insertion  Chr5599221159922114

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr14184689442019554LOC_Os01g72150
Inversion  Chr14184693842243948LOC_Os01g72150
Inversion  Chr14184693842243948LOC_Os01g72820
Inversion  Chr111720150020397027LOC_Os11g34820
Inversion  Chr71245822915047120

Translocations: 7

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr114466665Chr3212320642
Translocation  Chr1010928861Chr715046864
Translocation  Chr1011009945Chr712458226
Translocation  Chr1213392781Chr712441392
Translocation  Chr1115401594Chr103537148
Translocation  Chr522048732Chr232190495
Translocation  Chr1224683728Chr25772738