Mutant Information 

Mutant NameFN-292  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1022263051T-AHOMOINTERGENIC
SBS  Chr1012349371T-CHETNON_SYNONYMOUS_CODINGLOC_Os10g24100
SBS  Chr105799625G-AHETINTERGENIC
SBS  Chr112534072A-THETINTERGENIC
SBS  Chr1214579859C-AHETINTERGENIC
SBS  Chr1213168326T-CHOMOINTERGENIC
SBS  Chr129803497G-CHETINTERGENIC
SBS  Chr214825382C-THETINTERGENIC
SBS  Chr220731923C-GHETINTERGENIC
SBS  Chr3361939T-CHOMOUTR_3_PRIME
SBS  Chr333127137C-AHOMOINTERGENIC
SBS  Chr324045730A-GHETINTERGENIC
SBS  Chr3361943T-AHOMOUTR_3_PRIME
SBS  Chr41605980G-AHOMOSYNONYMOUS_CODING
SBS  Chr419377462A-CHETINTERGENIC
SBS  Chr4559327C-THETINTERGENIC
SBS  Chr56519464T-AHETINTERGENIC
SBS  Chr631088614A-GHOMOINTRON
SBS  Chr612318935G-THOMONON_SYNONYMOUS_CODINGLOC_Os06g21330
SBS  Chr721873828G-AHOMOINTERGENIC
SBS  Chr714324281G-AHETINTRON
SBS  Chr718327144C-THETINTERGENIC
SBS  Chr718984209A-THOMOINTERGENIC
SBS  Chr81364226A-CHETINTERGENIC
SBS  Chr811782242C-THOMOINTERGENIC
SBS  Chr91672863G-CHETINTERGENIC
SBS  Chr9317516A-GHETNON_SYNONYMOUS_CODINGLOC_Os09g01400
SBS  Chr96685438T-CHETINTERGENIC
SBS  Chr91672874T-AHETINTERGENIC
SBS  Chr9317518G-THETNON_SYNONYMOUS_CODINGLOC_Os09g01400

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1715660571566127
Deletion  Chr1016346031163460332
Deletion  Chr1017188734171887362LOC_Os10g32830
Deletion  Chr1119604581196067612180
Deletion  Chr12481762448176317
Deletion  Chr2816560381670721469LOC_Os02g14760
Deletion  Chr2133252013325266
Deletion  Chr223677792236777931LOC_Os02g39200
Deletion  Chr218230172182301731LOC_Os02g30620
Deletion  Chr329041791290417965
Deletion  Chr316846233168462407LOC_Os03g29560
Deletion  Chr46422247642230962LOC_Os04g11720
Deletion  Chr6255931392559315819
Deletion  Chr6108683571086841558
Deletion  Chr7177463171774635740
Deletion  Chr8637152763715336
Deletion  Chr98860094886010511LOC_Os09g14850

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr2395973639597361

Inversions: 6

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112074797220952082LOC_Os11g35400
Inversion  Chr112074797220952082LOC_Os11g35710
Inversion  Chr112074800320952088LOC_Os11g35400
Inversion  Chr112074800320952088LOC_Os11g35710
Inversion  Chr121500932815089625
Inversion  Chr31607233216357308LOC_Os03g27980

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr714276134Chr28165615LOC_Os02g14760