Mutant Information 

Mutant NameFN-293  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr136339905G-AHETINTERGENIC
SBS  Chr105795956A-GHETINTERGENIC
SBS  Chr1013677628C-AHETINTRON
SBS  Chr1016271613C-THETINTERGENIC
SBS  Chr1017938026T-CHETINTERGENIC
SBS  Chr1018049345T-AHETINTERGENIC
SBS  Chr1018049346A-THETINTERGENIC
SBS  Chr1018320891G-AHETINTERGENIC
SBS  Chr1019357174C-THETNON_SYNONYMOUS_CODINGLOC_Os10g36210
SBS  Chr11992736C-THETINTERGENIC
SBS  Chr1214934727C-THOMOINTERGENIC
SBS  Chr1226093835C-AHOMOUTR_3_PRIME
SBS  Chr1226093836C-AHOMOUTR_3_PRIME
SBS  Chr35427093G-AHETINTERGENIC
SBS  Chr322751975T-GHOMOINTERGENIC
SBS  Chr330482308A-CHOMOINTRON
SBS  Chr419003543C-THETINTERGENIC
SBS  Chr421989519G-THETUTR_3_PRIME
SBS  Chr423391208A-THETINTERGENIC
SBS  Chr416730447A-GHETINTERGENIC
SBS  Chr56163045T-CHETINTERGENIC
SBS  Chr629880447A-THETINTRON
SBS  Chr714971800C-AHETNON_SYNONYMOUS_CODINGLOC_Os07g26090
SBS  Chr716548461G-AHETINTERGENIC
SBS  Chr7870122C-THETINTRON
SBS  Chr821065675T-GHETINTERGENIC
SBS  Chr826115569C-AHETINTERGENIC
SBS  Chr99343191A-GHETINTERGENIC
SBS  Chr95181539G-AHOMOINTERGENIC
SBS  Chr91921121C-GHETINTERGENIC

Deletions: 7

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr10214725552147257116LOC_Os10g40100
Deletion  Chr1029760013009000330006
Deletion  Chr1215967595159676049LOC_Os12g27210
Deletion  Chr41743700117500000630007
Deletion  Chr561810016227000460006
Deletion  Chr715884800158848044
Deletion  Chr9192013819201468

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr218705944187059441
Insertion  Chr5651454165145411
Insertion  Chr6687713968771391

Inversions: 7

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112064505920889504LOC_Os11g35210
Inversion  Chr112064505920889504LOC_Os11g35630
Inversion  Chr41743711318776776LOC_Os04g29350
Inversion  Chr41749997318776807
Inversion  Chr7983498212703402
Inversion  Chr7983502212703403
Inversion  Chr91631299216356411

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr56181287Chr322392995LOC_Os05g11030
Translocation  Chr322392736Chr142830416LOC_Os01g73920