Mutant Information 

Mutant NameFN-294  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1219665C-THETINTRON
SBS  Chr16641284G-AHETINTERGENIC
SBS  Chr115670153G-AHETINTERGENIC
SBS  Chr123876649A-GHOMOINTERGENIC
SBS  Chr1022120816G-AHETINTERGENIC
SBS  Chr1015479332C-GHETINTERGENIC
SBS  Chr1022120817T-AHETINTERGENIC
SBS  Chr227405717A-GHETINTERGENIC
SBS  Chr319053631A-THETINTERGENIC
SBS  Chr3337310A-THETINTRON
SBS  Chr313038365C-THETINTRON
SBS  Chr416643252A-THOMOINTERGENIC
SBS  Chr418329895A-THOMOINTERGENIC
SBS  Chr512278089T-GHETINTERGENIC
SBS  Chr529886601T-AHOMOINTRON
SBS  Chr58654875C-THOMOINTERGENIC
SBS  Chr512247988C-THETINTERGENIC
SBS  Chr616381346A-GHETINTRON
SBS  Chr623376334T-AHOMOINTERGENIC
SBS  Chr728188200C-THOMOINTERGENIC
SBS  Chr88049933C-THOMONON_SYNONYMOUS_CODINGLOC_Os08g13540
SBS  Chr85074754T-GHOMOINTERGENIC
SBS  Chr811184368C-THETSYNONYMOUS_CODING
SBS  Chr922714848T-GHETINTRON

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr136986427369864303
Deletion  Chr1010418530104185311
Deletion  Chr10108154310815518
Deletion  Chr1018436741184367421LOC_Os10g34580
Deletion  Chr1121915681219156821
Deletion  Chr11156300391564698516946LOC_Os11g27170
Deletion  Chr2237346232373466340
Deletion  Chr2894116689411704LOC_Os02g15820
Deletion  Chr323176217231762203LOC_Os03g41710
Deletion  Chr328046105280461105LOC_Os03g49250
Deletion  Chr3283600012848800012800016
Deletion  Chr4321373032137344LOC_Os04g06180
Deletion  Chr430109642301096453
Deletion  Chr5272171812721720221LOC_Os05g47500
Deletion  Chr623279255232792594
Deletion  Chr622497618224976213
Deletion  Chr7224498722244989321
Deletion  Chr921226928212269291
Deletion  Chr9929431692943171

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr126698001266980011
Insertion  Chr131479258314792582
Insertion  Chr510990633109906331
Insertion  Chr6762918276291822
Insertion  Chr610564400105644001

Inversions: 13

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr129279023252011LOC_Os01g06140
Inversion  Chr129279023252011LOC_Os01g06870
Inversion  Chr13454592035829287
Inversion  Chr13454593435829281
Inversion  Chr21514957915207978
Inversion  Chr21514984415207985
Inversion  Chr32324885928488124LOC_Os03g41870
Inversion  Chr32324858623318779LOC_Os03g41960
Inversion  Chr51880125718934942LOC_Os05g32230
Inversion  Chr51880126918934948LOC_Os05g32230
Inversion  Chr875786748677274
Inversion  Chr875786948677272
Inversion  Chr932546273380845