Mutant Information 

Mutant NameFN-294  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1219665C-THETINTRON
SBS  Chr16641284G-AHETINTERGENIC
SBS  Chr115670153G-AHETINTERGENIC
SBS  Chr123876649A-GHOMOINTERGENIC
SBS  Chr1022120816G-AHETINTERGENIC
SBS  Chr1015479332C-GHETINTERGENIC
SBS  Chr1022120817T-AHETINTERGENIC
SBS  Chr227405717A-GHETINTERGENIC
SBS  Chr319053631A-THETINTERGENIC
SBS  Chr3337310A-THETINTRON
SBS  Chr313038365C-THETINTRON
SBS  Chr416643252A-THOMOINTERGENIC
SBS  Chr418329895A-THOMOINTERGENIC
SBS  Chr512278089T-GHETINTERGENIC
SBS  Chr529886601T-AHOMOINTRON
SBS  Chr58654875C-THOMOINTERGENIC
SBS  Chr512247988C-THETINTERGENIC
SBS  Chr616381346A-GHETINTRON
SBS  Chr623376334T-AHOMOINTERGENIC
SBS  Chr728188200C-THOMOINTERGENIC
SBS  Chr88049933C-THOMONON_SYNONYMOUS_CODINGLOC_Os08g13540 image
SBS  Chr85074754T-GHOMOINTERGENIC
SBS  Chr811184368C-THETSYNONYMOUS_CODING
SBS  Chr922714848T-GHETINTRON

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr136986427369864303
Deletion  Chr1010418530104185311
Deletion  Chr10108154310815518
Deletion  Chr1018436741184367421LOC_Os10g34580 image
Deletion  Chr1121915681219156821
Deletion  Chr11156300391564698516946LOC_Os11g27170 image
Deletion  Chr2237346232373466340
Deletion  Chr2894116689411704LOC_Os02g15820 image
Deletion  Chr323176217231762203LOC_Os03g41710 image
Deletion  Chr328046105280461105LOC_Os03g49250 image
Deletion  Chr3283600012848800012800016
Deletion  Chr4321373032137344LOC_Os04g06180 image
Deletion  Chr430109642301096453
Deletion  Chr5272171812721720221LOC_Os05g47500 image
Deletion  Chr622497618224976213
Deletion  Chr623279255232792594
Deletion  Chr7224498722244989321
Deletion  Chr9929431692943171
Deletion  Chr921226928212269291

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr126698001266980011
Insertion  Chr131479258314792582
Insertion  Chr510990633109906331
Insertion  Chr6762918276291822
Insertion  Chr610564400105644001

Inversions: 12

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1292790232520112
Inversion  Chr932546273380845 image
Inversion  Chr875786748677274
Inversion  Chr875786948677272
Inversion  Chr21514957915207978
Inversion  Chr21514984415207985
Inversion  Chr51880125718934942
Inversion  Chr51880126918934948
Inversion  Chr32324858623318779
Inversion  Chr32324885928488124
Inversion  Chr13454592035829287
Inversion  Chr13454593435829281