Mutant Information 

Mutant NameFN-296  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 18

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr111436125G-AHETINTERGENIC
SBS  Chr122209076A-GHETINTERGENIC
SBS  Chr11303376C-AHOMOINTERGENIC
SBS  Chr1220997080A-CHETINTERGENIC
SBS  Chr1215526604C-THETNON_SYNONYMOUS_CODINGLOC_Os12g26560
SBS  Chr123946803C-AHOMOINTERGENIC
SBS  Chr1227446979G-AHOMONON_SYNONYMOUS_CODINGLOC_Os12g44280
SBS  Chr212820408G-AHETINTERGENIC
SBS  Chr35184951A-GHOMOINTERGENIC
SBS  Chr335421346C-GHETINTERGENIC
SBS  Chr514069197G-AHETINTERGENIC
SBS  Chr51271151C-AHETINTERGENIC
SBS  Chr523507918C-AHETINTERGENIC
SBS  Chr54793300A-THETINTERGENIC
SBS  Chr514069198T-AHETINTERGENIC
SBS  Chr629446010C-THETINTERGENIC
SBS  Chr610146362C-THOMOINTERGENIC
SBS  Chr629506023T-CHETSYNONYMOUS_CODING

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr135615376356153771
Deletion  Chr1233320012345300012100020
Deletion  Chr1234550012367700022200044
Deletion  Chr12256203732562039219
Deletion  Chr2186052218605231
Deletion  Chr210074660100746611LOC_Os02g17500
Deletion  Chr2128782801287829414
Deletion  Chr3145059214505953
Deletion  Chr314048647140486492
Deletion  Chr334645390346453922
Deletion  Chr4830143883014446
Deletion  Chr422213656222136571LOC_Os04g36790
Deletion  Chr517520171175201732
Deletion  Chr528930497289305036
Deletion  Chr55747245747339
Deletion  Chr513170011344000270005
Deletion  Chr5111586081115862012
Deletion  Chr6376421837642191
Deletion  Chr6305155030515511
Deletion  Chr7189853931898543643
Deletion  Chr8155667361556675418
Deletion  Chr912935322129353242

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1216895887168958871
Insertion  Chr1223490639234906392

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr84203230Chr714061894LOC_Os07g24720