Mutant Information 

Mutant NameFN-299  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr16501056G-CHETUTR_3_PRIME
SBS  Chr129303296T-AHETINTERGENIC
SBS  Chr129303295T-AHETINTERGENIC
SBS  Chr122860132G-AHETINTERGENIC
SBS  Chr122305861C-AHETINTRON
SBS  Chr116379617G-AHETSYNONYMOUS_CODING
SBS  Chr114079329C-THETNON_SYNONYMOUS_CODINGLOC_Os01g24980
SBS  Chr1012701075A-THETNON_SYNONYMOUS_CODINGLOC_Os10g24700
SBS  Chr119942727T-AHETINTERGENIC
SBS  Chr1127111562T-GHOMOINTERGENIC
SBS  Chr211385050C-THOMOINTERGENIC
SBS  Chr228399484G-THOMOINTERGENIC
SBS  Chr228827182A-THOMOINTRON
SBS  Chr31838424C-AHOMONON_SYNONYMOUS_CODINGLOC_Os03g04030
SBS  Chr333415093C-THETINTRON
SBS  Chr329400125T-GHETINTRON
SBS  Chr315823492G-THOMOINTERGENIC
SBS  Chr317368123C-THETINTRON
SBS  Chr315823493C-THOMOINTERGENIC
SBS  Chr415325223C-AHOMOSTOP_GAINEDLOC_Os04g26290
SBS  Chr419890914G-THETINTRON
SBS  Chr422876638A-THETINTERGENIC
SBS  Chr56635408T-AHETINTERGENIC
SBS  Chr56635407G-AHETINTERGENIC
SBS  Chr625778143G-AHOMOINTERGENIC
SBS  Chr65672130T-AHOMOINTERGENIC
SBS  Chr622335558T-GHOMOINTERGENIC
SBS  Chr712794095C-THETINTERGENIC
SBS  Chr99760900G-AHETNON_SYNONYMOUS_CODINGLOC_Os09g15970
SBS  Chr910997562G-AHETINTRON

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr102800846280086923
Deletion  Chr11289747782897479719
Deletion  Chr1223181686231816926
Deletion  Chr12402101940210234
Deletion  Chr225032000250320055
Deletion  Chr363604164038643452
Deletion  Chr3113670501136706111
Deletion  Chr31554911554976
Deletion  Chr312955379129553867
Deletion  Chr428728266287282671
Deletion  Chr55450558545057012
Deletion  Chr6146060731460609017

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr101943211519571621LOC_Os10g36370