Mutant Information 

Mutant NameFN-30  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr124695713T-CHomoINTRON
SBS  Chr134055245G-AHomoNON_SYNONYMOUS_CODINGLOC_Os01g58920
SBS  Chr134055246T-AHomoNON_SYNONYMOUS_CODINGLOC_Os01g58920
SBS  Chr1121493015A-GHETSYNONYMOUS_CODING
SBS  Chr1226336025C-THomoNON_SYNONYMOUS_CODINGLOC_Os12g42370
SBS  Chr228418885A-GHomoINTERGENIC
SBS  Chr215182261C-THomoINTERGENIC
SBS  Chr34794908T-CHomoINTRON
SBS  Chr327917629T-CHomoINTERGENIC
SBS  Chr335423128A-CHomoINTERGENIC
SBS  Chr335423129C-AHomoINTERGENIC
SBS  Chr41390369G-CHomoNON_SYNONYMOUS_CODINGLOC_Os04g03260
SBS  Chr422390423C-THomoINTRON
SBS  Chr431431238C-THomoINTERGENIC
SBS  Chr5989974T-GHETNON_SYNONYMOUS_CODINGLOC_Os05g02750
SBS  Chr54362126C-THomoINTERGENIC
SBS  Chr629675802C-THomoINTRON
SBS  Chr624772807G-AHomoINTERGENIC
SBS  Chr78994596T-CHomoINTRON
SBS  Chr722887466C-THomoINTERGENIC
SBS  Chr724278356A-GHomoINTERGENIC
SBS  Chr815486591C-THomoINTERGENIC
SBS  Chr815486593A-THomoINTERGENIC
SBS  Chr916033820T-AHETINTRON

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1221130742211310026
Deletion  Chr1386314863863149592
Deletion  Chr1671773667177371
Deletion  Chr109471869471893
Deletion  Chr1021603197216031981
Deletion  Chr11292659729265992LOC_Os11g06140
Deletion  Chr1120421576204215793LOC_Os11g34850
Deletion  Chr1216153889161538934
Deletion  Chr3340260013421000018400039
Deletion  Chr410586346105863471
Deletion  Chr418903112189031142
Deletion  Chr624787594247875962
Deletion  Chr629507911295079154
Deletion  Chr6805613880561402
Deletion  Chr7165629651656298116
Deletion  Chr98970001917200020200015

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1119118308191183082
Insertion  Chr8307942330794231LOC_Os08g05750

Inversions: 7

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr117266420320414LOC_Os01g01350
Inversion  Chr12025600320320421
Inversion  Chr72832998428985004LOC_Os07g47360
Inversion  Chr72833002028985004LOC_Os07g47360
Inversion  Chr975141628961545LOC_Os09g13030
Inversion  Chr9968375011417482LOC_Os09g15850
Inversion  Chr9968375011417482LOC_Os09g19136

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1221575715Chr6201714022
Translocation  Chr1221575716Chr620169100LOC_Os12g35480