Mutant Information 

Mutant NameFN-300  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 17

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19755647T-AHETINTRON
SBS  Chr115432521G-AHETINTERGENIC
SBS  Chr1224447372G-CHETNON_SYNONYMOUS_CODINGLOC_Os12g39610
SBS  Chr235922079G-AHOMOINTERGENIC
SBS  Chr228246625G-AHETNON_SYNONYMOUS_CODINGLOC_Os02g46340
SBS  Chr29555235A-CHETINTERGENIC
SBS  Chr39847972T-CHOMONON_SYNONYMOUS_CODINGLOC_Os03g17700
SBS  Chr312559894A-THETINTERGENIC
SBS  Chr313462453C-AHETINTRON
SBS  Chr430851457G-AHOMOINTERGENIC
SBS  Chr61359840T-CHETINTERGENIC
SBS  Chr619419740C-THETINTRON
SBS  Chr716590362C-AHETINTRON
SBS  Chr87422353C-GHETINTRON
SBS  Chr827750778A-GHOMOINTERGENIC
SBS  Chr96264887C-THETINTERGENIC
SBS  Chr98614638G-THOMOINTRON

Deletions: 20

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr133739598337396035
Deletion  Chr140095189400951967LOC_Os01g69010
Deletion  Chr126230978262309835LOC_Os01g46130
Deletion  Chr1018064855180648616
Deletion  Chr1126326831263268332
Deletion  Chr12856874885687557LOC_Os12g14984
Deletion  Chr1210933232109354082176
Deletion  Chr3250600012516400010400020
Deletion  Chr418537477185374825
Deletion  Chr51363100113668000370005
Deletion  Chr554013540196
Deletion  Chr516293355162933561
Deletion  Chr611170543111705507LOC_Os06g19590
Deletion  Chr619419723194197318LOC_Os06g33340
Deletion  Chr614544522145445297
Deletion  Chr722979439229794456LOC_Os07g38280
Deletion  Chr726007221260072265LOC_Os07g43430
Deletion  Chr8953452295345286
Deletion  Chr895321089532743635
Deletion  Chr91742659717441761151643

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr2891803889180381
Insertion  Chr5697042869704282

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr32523989625475387LOC_Os03g44760
Inversion  Chr72562298025729325LOC_Os07g42960
Inversion  Chr72572934325763369LOC_Os07g42960
Inversion  Chr72572934325763369LOC_Os07g43010
Inversion  Chr81039742410420590

Translocations: 6

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr89532743Chr16888203
Translocation  Chr1210935145Chr726130822
Translocation  Chr1210935389Chr726810955LOC_Os07g44950
Translocation  Chr726130988Chr325239910LOC_Os03g44760
Translocation  Chr726131405Chr325475977
Translocation  Chr1127310627Chr107352616