Mutant Information 

Mutant NameFN-304  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability No


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr16715658G-THOMOINTERGENIC
SBS  Chr140959654G-CHETNON_SYNONYMOUS_CODINGLOC_Os01g70760
SBS  Chr141558553T-GHETINTRON
SBS  Chr106999689A-CHETINTRON
SBS  Chr1010514701C-THETSTOP_GAINEDLOC_Os10g20750
SBS  Chr1015687337G-AHETINTERGENIC
SBS  Chr1015972716G-AHETINTERGENIC
SBS  Chr119995257G-THETINTRON
SBS  Chr1115990726A-THETINTERGENIC
SBS  Chr1120306576G-AHETINTRON
SBS  Chr1121563474T-CHETSYNONYMOUS_CODING
SBS  Chr1214362037C-AHOMOINTRON
SBS  Chr25192179A-GHOMOINTERGENIC
SBS  Chr224024939C-THETINTERGENIC
SBS  Chr37872432C-THOMONON_SYNONYMOUS_CODINGLOC_Os03g14500
SBS  Chr330559429G-AHETINTERGENIC
SBS  Chr415236262T-GHETINTERGENIC
SBS  Chr427690026C-THOMOINTERGENIC
SBS  Chr512145728T-GHETINTRON
SBS  Chr59743899G-THETINTERGENIC
SBS  Chr59743900A-THETINTERGENIC
SBS  Chr517507678G-CHETNON_SYNONYMOUS_CODINGLOC_Os05g30210
SBS  Chr916029429C-AHETUTR_3_PRIME
SBS  Chr92525604C-GHOMONON_SYNONYMOUS_CODINGLOC_Os09g04740

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1387913623879138624
Deletion  Chr130375569303755701LOC_Os01g52790
Deletion  Chr10701935270193608
Deletion  Chr1015459217154592192LOC_Os10g29730
Deletion  Chr1123468675234686761
Deletion  Chr12136778051367781510
Deletion  Chr121381873513819677942LOC_Os12g24250
Deletion  Chr121491500114929000140002
Deletion  Chr231897686318976871
Deletion  Chr330654998306550057
Deletion  Chr429680647296806492
Deletion  Chr419115424191154251
Deletion  Chr525445490254454944
Deletion  Chr66682192668220715
Deletion  Chr610006800100068044LOC_Os06g17280
Deletion  Chr77942646794266519
Deletion  Chr94343267434328013

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr316074788160747881
Insertion  Chr726263863262638631

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr111190837211921615LOC_Os11g20554
Inversion  Chr121491571014939454LOC_Os12g25720
Inversion  Chr121492913414939461
Inversion  Chr736725083761723LOC_Os07g07540

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1213819651Chr73672508LOC_Os12g24250