Mutant Information 

Mutant NameFN-305  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 40

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr17228290A-GHETINTERGENIC
SBS  Chr121224047G-AHOMOINTERGENIC
SBS  Chr122752246C-THOMOINTERGENIC
SBS  Chr1120734722C-GHOMOINTERGENIC
SBS  Chr1118294066C-THETINTERGENIC
SBS  Chr1114183016G-AHETINTERGENIC
SBS  Chr1113023698C-THETINTERGENIC
SBS  Chr1112935382G-AHETINTRON
SBS  Chr1110919776G-THETNON_SYNONYMOUS_CODINGLOC_Os11g19140
SBS  Chr1110919775A-THETNON_SYNONYMOUS_CODINGLOC_Os11g19140
SBS  Chr1122361013G-CHOMOINTERGENIC
SBS  Chr111915309T-AHETINTERGENIC
SBS  Chr124565197A-THOMOINTERGENIC
SBS  Chr124565205A-GHOMOINTERGENIC
SBS  Chr127901600G-AHOMOINTERGENIC
SBS  Chr1210877060G-AHOMONON_SYNONYMOUS_CODINGLOC_Os12g18780
SBS  Chr1213764145T-AHOMOINTRON
SBS  Chr1214464052G-AHOMOINTERGENIC
SBS  Chr1215113878G-AHETINTERGENIC
SBS  Chr123001467G-THOMOINTERGENIC
SBS  Chr1223779575G-AHETSYNONYMOUS_CODING
SBS  Chr318923837C-GHETINTERGENIC
SBS  Chr37277624G-AHETUTR_3_PRIME
SBS  Chr326057055A-GHETINTERGENIC
SBS  Chr331047456G-THETINTERGENIC
SBS  Chr335811679C-THOMOINTRON
SBS  Chr317035047C-THETINTRON
SBS  Chr415457824A-CHOMOINTERGENIC
SBS  Chr57650721G-AHETINTRON
SBS  Chr68782152G-AHETINTRON
SBS  Chr69907388C-THETINTERGENIC
SBS  Chr611256057C-THETNON_SYNONYMOUS_CODINGLOC_Os06g19710
SBS  Chr617016216A-THETINTERGENIC
SBS  Chr622307570C-THETNON_SYNONYMOUS_CODINGLOC_Os06g37660
SBS  Chr631199284G-AHOMOINTERGENIC
SBS  Chr63644793T-AHOMOINTERGENIC
SBS  Chr715972495C-AHETINTERGENIC
SBS  Chr815971154G-AHOMOINTERGENIC
SBS  Chr84103574G-CHETINTERGENIC
SBS  Chr810814645C-THETINTERGENIC

Deletions: 15

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr12573082573157
Deletion  Chr125962894259628995
Deletion  Chr116062921606294221
Deletion  Chr29466479466481
Deletion  Chr2136567813656791
Deletion  Chr222711551227115521LOC_Os02g37630
Deletion  Chr212512140125121444
Deletion  Chr315525495155254961
Deletion  Chr3178010011847700067600087
Deletion  Chr525520512255205131
Deletion  Chr6209467372094675215
Deletion  Chr6284712892847130415LOC_Os06g46920
Deletion  Chr720743379207433812
Deletion  Chr819237387192373892
Deletion  Chr824510304245103117

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr728235462282354621

Inversions: 9

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr23004968132027619
Inversion  Chr51553580716012750LOC_Os05g26780
Inversion  Chr51553582316012752LOC_Os05g26780
Inversion  Chr61064027811829880
Inversion  Chr71281166014451861LOC_Os07g22720
Inversion  Chr71281972314451875
Inversion  Chr71757625918130238
Inversion  Chr91626684117464150
Inversion  Chr91634562217464134

Translocations: 5

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr515534425Chr417874554LOC_Os04g29960
Translocation  Chr1021155204Chr319055130LOC_Os10g39570
Translocation  Chr1021155210Chr3190529002
Translocation  Chr726021634Chr610638036LOC_Os07g43470
Translocation  Chr726021644Chr610640230LOC_Os07g43470