Mutant Information 

Mutant NameFN-312  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 21

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr12841562C-THOMOSYNONYMOUS_CODING
SBS  Chr1018046186G-AHOMOINTERGENIC
SBS  Chr1012934534A-GHETINTERGENIC
SBS  Chr106272445T-CHETINTERGENIC
SBS  Chr105619500C-THOMONON_SYNONYMOUS_CODINGLOC_Os10g10214
SBS  Chr114555215G-AHETINTRON
SBS  Chr124371711C-THETINTERGENIC
SBS  Chr1224242495C-THOMOINTERGENIC
SBS  Chr21537019C-THETINTERGENIC
SBS  Chr28100182C-THETINTERGENIC
SBS  Chr232082078T-AHETINTRON
SBS  Chr233156154G-AHETINTERGENIC
SBS  Chr429039405A-GHETINTERGENIC
SBS  Chr412752620C-THETINTERGENIC
SBS  Chr415502996G-AHETINTERGENIC
SBS  Chr427580468C-THETINTERGENIC
SBS  Chr429039406C-THETINTERGENIC
SBS  Chr630145038C-THETINTERGENIC
SBS  Chr728682163A-CHOMOINTERGENIC
SBS  Chr71065828A-GHOMOINTERGENIC
SBS  Chr912081052T-CHOMOINTRON

Deletions: 14

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1217192642171928218
Deletion  Chr1488403648840393LOC_Os01g09550
Deletion  Chr108009118009121
Deletion  Chr11558933055893311
Deletion  Chr112147521214753918
Deletion  Chr216345210163452111LOC_Os02g27592
Deletion  Chr218489826184898293
Deletion  Chr3340842033408421310
Deletion  Chr333889873338898796
Deletion  Chr46532686532768
Deletion  Chr529074293290742941
Deletion  Chr625213206252132137
Deletion  Chr611847141118471498LOC_Os06g20580
Deletion  Chr7619224561922527

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr113173853173851
Insertion  Chr420326665203266651
Insertion  Chr911628247116282471

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr62864420129620294LOC_Os06g47250
Inversion  Chr62864454529620308LOC_Os06g47250