Mutant Information 

Mutant NameFN-315  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr131983844G-CHOMOINTERGENIC
SBS  Chr136808585G-CHETNON_SYNONYMOUS_CODINGLOC_Os01g63500
SBS  Chr1013337630C-THETINTERGENIC
SBS  Chr1013337638C-THETINTERGENIC
SBS  Chr1015363767G-THOMOSTOP_GAINEDLOC_Os10g29560
SBS  Chr1015363768A-THOMONON_SYNONYMOUS_CODINGLOC_Os10g29560
SBS  Chr1017686108C-GHETINTERGENIC
SBS  Chr1022213960C-THETINTRON
SBS  Chr1128807153C-THETNON_SYNONYMOUS_CODINGLOC_Os11g47760
SBS  Chr1211919127C-THETINTERGENIC
SBS  Chr211385050C-THOMOINTERGENIC
SBS  Chr232559293C-THETINTRON
SBS  Chr312934779G-AHOMOINTERGENIC
SBS  Chr31838424C-AHOMONON_SYNONYMOUS_CODINGLOC_Os03g04030
SBS  Chr419045630C-THOMOINTRON
SBS  Chr415325223C-AHOMOSTOP_GAINEDLOC_Os04g26290
SBS  Chr41605980G-AHETSYNONYMOUS_CODING
SBS  Chr425149271A-GHOMOINTRON
SBS  Chr520369899T-AHOMOINTERGENIC
SBS  Chr58147325T-AHETINTERGENIC
SBS  Chr54996872T-AHETINTERGENIC
SBS  Chr628349617G-AHOMONON_SYNONYMOUS_CODINGLOC_Os06g46670
SBS  Chr628430656A-GHOMOINTERGENIC
SBS  Chr627589237G-AHOMOINTRON
SBS  Chr620211010G-AHOMOINTERGENIC
SBS  Chr723427933G-AHOMOINTRON
SBS  Chr75973416T-GHETINTRON
SBS  Chr88046584A-THETINTERGENIC
SBS  Chr921615299G-AHETINTERGENIC
SBS  Chr95171851G-THOMOINTERGENIC

Deletions: 8

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr10149500011505200010200020
Deletion  Chr101505500115953000898000181
Deletion  Chr10159700011643700046700055
Deletion  Chr102066000120724000640007
Deletion  Chr429177228291772346LOC_Os04g48920
Deletion  Chr8538590753859092LOC_Os08g09270
Deletion  Chr820862594208625973
Deletion  Chr917870669178706767

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10724874872487481
Insertion  Chr921908464219084641

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr21444842914459672
Inversion  Chr21444844514459686
Inversion  Chr541579885113967
Inversion  Chr541580304405185LOC_Os05g08090