Mutant Information 

Mutant NameFN-316  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 26

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr14633858T-CHETINTERGENIC
SBS  Chr15987617A-GHETINTERGENIC
SBS  Chr18996973G-THETUTR_3_PRIME
SBS  Chr115182094T-CHETINTERGENIC
SBS  Chr105263382T-CHOMOINTERGENIC
SBS  Chr1125971672G-AHETINTERGENIC
SBS  Chr221379491T-AHETINTERGENIC
SBS  Chr323211887C-GHETINTERGENIC
SBS  Chr323592191A-GHETNON_SYNONYMOUS_CODINGLOC_Os03g42400
SBS  Chr321725611T-GHETINTERGENIC
SBS  Chr41466497T-GHETINTERGENIC
SBS  Chr44730918C-GHOMOINTERGENIC
SBS  Chr421386815C-GHOMOINTRON
SBS  Chr428475588G-AHETINTERGENIC
SBS  Chr518836457G-AHOMOINTERGENIC
SBS  Chr55479984A-THOMOINTERGENIC
SBS  Chr623107233T-CHETINTRON
SBS  Chr623107237G-AHETINTRON
SBS  Chr68890965C-AHETUTR_5_PRIME
SBS  Chr715632644G-AHETINTERGENIC
SBS  Chr710672518C-THETINTRON
SBS  Chr84056670G-AHETINTERGENIC
SBS  Chr84321861T-AHETINTERGENIC
SBS  Chr84075131G-AHETNON_SYNONYMOUS_CODINGLOC_Os08g07290
SBS  Chr98832010C-AHETINTERGENIC
SBS  Chr918659604T-AHETINTERGENIC

Deletions: 9

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr12441200124467000550005
Deletion  Chr1475015047501511
Deletion  Chr10928001946000180002
Deletion  Chr1011963716119637193
Deletion  Chr2288313922883141624
Deletion  Chr29637211963723120
Deletion  Chr517682801176828054
Deletion  Chr649350014965000300005
Deletion  Chr812811728128117346

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr522232048222320481

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12147819221765342
Inversion  Chr12215433022181730LOC_Os01g39360