Mutant Information 

Mutant NameFN-334  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 23

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr11868501G-THOMOSYNONYMOUS_CODING
SBS  Chr112658613C-THETINTERGENIC
SBS  Chr142063109G-AHOMOINTERGENIC
SBS  Chr1013491442C-THOMOINTERGENIC
SBS  Chr1013424894A-THOMOINTERGENIC
SBS  Chr104569621C-AHOMOINTRON
SBS  Chr1118398403C-THETSYNONYMOUS_CODING
SBS  Chr1117597017G-CHETINTERGENIC
SBS  Chr1225661792G-AHOMOINTERGENIC
SBS  Chr214130854A-THOMOINTRON
SBS  Chr231453516C-AHETINTERGENIC
SBS  Chr231453517C-AHETINTERGENIC
SBS  Chr231985560G-AHETINTERGENIC
SBS  Chr336204771A-GHOMONON_SYNONYMOUS_CODINGLOC_Os03g64070
SBS  Chr414892899T-AHETINTRON
SBS  Chr4157969T-CHETINTERGENIC
SBS  Chr512270422C-AHOMOINTERGENIC
SBS  Chr72768423C-AHETUTR_3_PRIME
SBS  Chr724458036T-AHETNON_SYNONYMOUS_CODINGLOC_Os07g40810
SBS  Chr79267216A-THETINTERGENIC
SBS  Chr73105361G-AHETUTR_3_PRIME
SBS  Chr823084478G-CHETINTERGENIC
SBS  Chr97337720T-AHETINTRON

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1010170776101707771
Deletion  Chr10193831001938313131
Deletion  Chr1238290013864000350005
Deletion  Chr1220099383200993907
Deletion  Chr1225665220256652222LOC_Os12g41430
Deletion  Chr232919577329195781
Deletion  Chr3106215410621606
Deletion  Chr3948130194813054LOC_Os03g17050
Deletion  Chr32507526825092826175582
Deletion  Chr417020243170202507
Deletion  Chr4161095891610960718
Deletion  Chr45305001562100031600051
Deletion  Chr526618236266182371
Deletion  Chr614651564146515706
Deletion  Chr627044678270446791
Deletion  Chr713397201133972021
Deletion  Chr719538479195384801
Deletion  Chr7903334390333518
Deletion  Chr721754959217549601LOC_Os07g36390

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr142943249429432494
Insertion  Chr11488820948882092
Insertion  Chr3509341150934111
Insertion  Chr3509341650934161
Insertion  Chr822514737225147371