Mutant Information 

Mutant NameFN-335  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 41

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr15170020C-THETINTERGENIC
SBS  Chr17568839C-THETINTERGENIC
SBS  Chr113878753C-THOMOINTERGENIC
SBS  Chr138041961C-THETINTRON
SBS  Chr1015995155A-GHOMOINTERGENIC
SBS  Chr1013640841G-THOMOINTERGENIC
SBS  Chr1010517083G-CHOMONON_SYNONYMOUS_CODINGLOC_Os10g20750
SBS  Chr101765985T-AHETINTERGENIC
SBS  Chr1115577217C-THETINTERGENIC
SBS  Chr1112836226G-AHETNON_SYNONYMOUS_CODINGLOC_Os11g22380
SBS  Chr1115345876A-THETINTERGENIC
SBS  Chr1113728548C-THETINTERGENIC
SBS  Chr125480418A-THETINTERGENIC
SBS  Chr1212528677T-CHETINTERGENIC
SBS  Chr1225050252G-AHETINTERGENIC
SBS  Chr1225250301G-AHETNON_SYNONYMOUS_CODINGLOC_Os12g40790
SBS  Chr1227446979G-AHOMONON_SYNONYMOUS_CODINGLOC_Os12g44280
SBS  Chr215878069A-GHOMOINTERGENIC
SBS  Chr210416176G-AHOMOINTERGENIC
SBS  Chr221599967A-THETINTRON
SBS  Chr3763340C-THETINTERGENIC
SBS  Chr314799387T-AHETINTERGENIC
SBS  Chr335538309G-AHETINTERGENIC
SBS  Chr425068562A-GHETINTRON
SBS  Chr423737753G-THETINTRON
SBS  Chr416827767G-AHETINTERGENIC
SBS  Chr55728893G-AHETNON_SYNONYMOUS_CODINGLOC_Os05g10540
SBS  Chr510725039C-THETINTRON
SBS  Chr6907564G-AHETINTERGENIC
SBS  Chr67410395G-AHETINTERGENIC
SBS  Chr610146362C-THETINTERGENIC
SBS  Chr76368225C-GHOMOINTERGENIC
SBS  Chr718811760A-THOMOINTERGENIC
SBS  Chr720922143C-AHETINTERGENIC
SBS  Chr718811758A-THOMOINTERGENIC
SBS  Chr723199582G-CHETINTERGENIC
SBS  Chr725446474A-THETINTERGENIC
SBS  Chr75485502C-AHOMONON_SYNONYMOUS_CODINGLOC_Os07g10200
SBS  Chr920708310G-THETINTERGENIC
SBS  Chr920708311C-THETINTERGENIC
SBS  Chr922921082T-CHETINTRON

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1204030622040308018
Deletion  Chr116910236169102437
Deletion  Chr130905367309053692
Deletion  Chr117822712178227131
Deletion  Chr1014289096142891037LOC_Os10g27110
Deletion  Chr119797532979754917
Deletion  Chr11155369651553700439
Deletion  Chr1124241474242414751
Deletion  Chr12379943137994321
Deletion  Chr222514839225148423LOC_Os02g37254
Deletion  Chr210074660100746611LOC_Os02g17500
Deletion  Chr3320208003202081414
Deletion  Chr334614583461851393
Deletion  Chr334258234342594231189LOC_Os03g60240
Deletion  Chr3314779743147799319
Deletion  Chr335319588353195891
Deletion  Chr426675079266750801LOC_Os04g45090
Deletion  Chr5533131653313204LOC_Os05g09480
Deletion  Chr72636027826360784506
Deletion  Chr728875945288759461
Deletion  Chr8154576631545767714
Deletion  Chr8917002991700345

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr139804019398040192
Insertion  Chr316708020167080202
Insertion  Chr71455532145553212

Inversions: 8

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr137839015169919LOC_Os01g07860
Inversion  Chr32622815534259386LOC_Os03g60240
Inversion  Chr33265465832883880LOC_Os03g57690
Inversion  Chr7745085710097744
Inversion  Chr7745102610098265LOC_Os07g17170
Inversion  Chr71009774723199001LOC_Os07g38620
Inversion  Chr71009826323198996LOC_Os07g17170
Inversion  Chr71009826323198996LOC_Os07g38620

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr129725498Chr410817551