Mutant Information 

Mutant NameFN-339  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 21

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr116305129C-THETINTERGENIC
SBS  Chr1012061863A-THETINTRON
SBS  Chr1110820182C-GHETINTERGENIC
SBS  Chr119844391C-THETINTERGENIC
SBS  Chr128922609G-AHETSYNONYMOUS_CODING
SBS  Chr24434320C-AHOMOINTRON
SBS  Chr227218353G-AHETINTERGENIC
SBS  Chr32991480A-GHOMOINTERGENIC
SBS  Chr314422760C-THETINTERGENIC
SBS  Chr424360685C-THETINTERGENIC
SBS  Chr528510664C-THETINTERGENIC
SBS  Chr527909378A-THETINTERGENIC
SBS  Chr51762616C-THETUTR_3_PRIME
SBS  Chr51792170A-THETINTERGENIC
SBS  Chr520183329G-AHETSYNONYMOUS_CODING
SBS  Chr62955634G-THETNON_SYNONYMOUS_CODINGLOC_Os06g06350
SBS  Chr614879282C-GHETINTERGENIC
SBS  Chr724596961C-THOMONON_SYNONYMOUS_CODINGLOC_Os07g41090
SBS  Chr818272390G-AHETINTRON
SBS  Chr85670420G-AHOMOINTERGENIC
SBS  Chr819170691G-AHETINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1213007371130073721
Deletion  Chr12212731721273181
Deletion  Chr12744323774432381
Deletion  Chr12883387888338791
Deletion  Chr1223906716239067171
Deletion  Chr122702947270297427
Deletion  Chr1211066314110663217
Deletion  Chr232168028321680335
Deletion  Chr3154683615468371
Deletion  Chr325263134252631351
Deletion  Chr329621127296211292
Deletion  Chr4493957949395801
Deletion  Chr520167680201676811
Deletion  Chr528865420288654255
Deletion  Chr817268651172686521LOC_Os08g28290
Deletion  Chr8165385191653853112LOC_Os08g27070
Deletion  Chr8160320011627200024000043

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr434768945347689451
Insertion  Chr6457718245771821