Mutant Information 

Mutant NameFN-342  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 28

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr14376542A-CHETNON_SYNONYMOUS_CODINGLOC_Os01g08750
SBS  Chr19654668G-AHETINTERGENIC
SBS  Chr142549954C-THETNON_SYNONYMOUS_CODINGLOC_Os01g73430
SBS  Chr1013809827C-GHOMOINTERGENIC
SBS  Chr1116385279A-THOMOINTERGENIC
SBS  Chr1116385278C-THOMOINTERGENIC
SBS  Chr112166157G-CHETINTERGENIC
SBS  Chr125263791C-GHOMOINTERGENIC
SBS  Chr210650572T-GHOMOINTRON
SBS  Chr27126357T-AHETUTR_3_PRIME
SBS  Chr22924630G-AHETINTRON
SBS  Chr22249828A-GHETINTERGENIC
SBS  Chr32423689C-THETNON_SYNONYMOUS_CODINGLOC_Os03g05000
SBS  Chr334853007A-GHETINTERGENIC
SBS  Chr333686502G-AHOMOINTRON
SBS  Chr314643017G-AHETSTOP_GAINEDLOC_Os03g25590
SBS  Chr428164503T-CHETNON_SYNONYMOUS_CODINGLOC_Os04g47460
SBS  Chr41355620G-THETNON_SYNONYMOUS_CODINGLOC_Os04g03200
SBS  Chr610022789G-AHOMOINTERGENIC
SBS  Chr631153956T-CHETNON_SYNONYMOUS_CODINGLOC_Os06g51430
SBS  Chr624377401G-AHETINTERGENIC
SBS  Chr69103552T-CHOMOINTERGENIC
SBS  Chr74273251A-GHETINTERGENIC
SBS  Chr816214692G-THOMOINTERGENIC
SBS  Chr87053258G-AHETINTERGENIC
SBS  Chr92208603T-CHOMOINTRON
SBS  Chr94509515C-THOMOINTERGENIC
SBS  Chr913195474C-THETNON_SYNONYMOUS_CODINGLOC_Os09g21790

Deletions: 25

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr116355535163582212686LOC_Os01g29190
Deletion  Chr135637644356376495
Deletion  Chr128370391283703943LOC_Os01g49340
Deletion  Chr1347841753478418712
Deletion  Chr10136297561362979741
Deletion  Chr1014914610149146144
Deletion  Chr1116372828163728302
Deletion  Chr118234678234692LOC_Os11g02610
Deletion  Chr113332420333248363LOC_Os11g06810
Deletion  Chr12815980281598108
Deletion  Chr121176524117653612
Deletion  Chr2334503373345035114
Deletion  Chr2480564806711
Deletion  Chr233683494336835017
Deletion  Chr2813053181305398
Deletion  Chr312535001254121621
Deletion  Chr329154006291540071
Deletion  Chr3386019038601911LOC_Os03g07580
Deletion  Chr411673295116732972
Deletion  Chr414620732146207386
Deletion  Chr5213758921375901
Deletion  Chr51338764713388305658LOC_Os05g23430
Deletion  Chr6262600562626007014
Deletion  Chr75748306574832620
Deletion  Chr9123973791239739213

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr138205486382054862

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr72845785028592902LOC_Os07g47860

Translocations: 5

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr11924355Chr624028763LOC_Os11g02780
Translocation  Chr111393556Chr624028759LOC_Os11g03590
Translocation  Chr1216513845Chr310722283
Translocation  Chr1216513862Chr310719554
Translocation  Chr423716375Chr233948995LOC_Os04g39814