Mutant Information 

Mutant NameFN-345  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 34

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr129285224A-THETINTERGENIC
SBS  Chr1017406863G-THETINTERGENIC
SBS  Chr1017406864G-THETINTERGENIC
SBS  Chr1022372015T-AHETINTERGENIC
SBS  Chr11778173C-THOMOINTERGENIC
SBS  Chr1125565984A-GHETINTERGENIC
SBS  Chr128728049T-AHETINTRON
SBS  Chr128728050T-CHETINTRON
SBS  Chr129725374G-AHETINTERGENIC
SBS  Chr1214234904G-CHETINTERGENIC
SBS  Chr231156076G-AHETINTERGENIC
SBS  Chr2593864A-THETINTERGENIC
SBS  Chr225507571G-AHETINTERGENIC
SBS  Chr334297390G-AHOMOINTERGENIC
SBS  Chr326439197T-AHETINTERGENIC
SBS  Chr322196267C-AHETINTERGENIC
SBS  Chr3774768C-THETNON_SYNONYMOUS_CODINGLOC_Os03g02270
SBS  Chr3151486G-CHOMOINTERGENIC
SBS  Chr330215260T-CHOMOINTERGENIC
SBS  Chr327429748C-THETINTERGENIC
SBS  Chr431272806T-AHOMOINTERGENIC
SBS  Chr415357983C-THETINTERGENIC
SBS  Chr415357982C-AHETINTERGENIC
SBS  Chr53415147T-CHETNON_SYNONYMOUS_CODINGLOC_Os05g06610
SBS  Chr66959951C-THOMOINTERGENIC
SBS  Chr718160613A-THETUTR_3_PRIME
SBS  Chr726582957A-THETNON_SYNONYMOUS_CODINGLOC_Os07g44520
SBS  Chr726582956C-THETNON_SYNONYMOUS_CODINGLOC_Os07g44520
SBS  Chr713658890A-GHOMOINTERGENIC
SBS  Chr89191549C-THOMOINTERGENIC
SBS  Chr918061610C-THETINTRON
SBS  Chr918061609C-GHETINTRON
SBS  Chr94076991G-AHOMOSYNONYMOUS_CODING
SBS  Chr95709653G-CHOMOINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr130842543308425496LOC_Os01g53680
Deletion  Chr10133900114070006800015
Deletion  Chr101417001187900046200065
Deletion  Chr101885001246500058000080
Deletion  Chr10118527931185280916
Deletion  Chr1125471730254717333
Deletion  Chr1120376926203769348
Deletion  Chr315868867158688692
Deletion  Chr315231712152317208
Deletion  Chr424922489249224945
Deletion  Chr6974011897401246
Deletion  Chr628700757287007614
Deletion  Chr6249060702490608515
Deletion  Chr7838885683888582
Deletion  Chr7161529701615299020
Deletion  Chr8480122648029411715
Deletion  Chr914543553145435574

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1123843690238436901
Insertion  Chr82348712348716
Insertion  Chr8334790633479062

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1013397582505071
Inversion  Chr946624624697485
Inversion  Chr946725664697493
Inversion  Chr950002576127341LOC_Os09g11030
Inversion  Chr961251016127325LOC_Os09g11030

Translocations: 8

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr113449819Chr415170581
Translocation  Chr94664982Chr18717123
Translocation  Chr94672567Chr18717160
Translocation  Chr84801249Chr5760426LOC_Os05g02350
Translocation  Chr84802940Chr5760426LOC_Os05g02350
Translocation  Chr96125104Chr129817223LOC_Os01g51860
Translocation  Chr96126258Chr1298172262
Translocation  Chr1226369019Chr94664774