Mutant Information 

Mutant NameFN-346  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr137197165T-CHETINTRON
SBS  Chr1014619522C-THOMOINTERGENIC
SBS  Chr1011107195A-THETINTERGENIC
SBS  Chr1125114441G-THETINTERGENIC
SBS  Chr1119648869C-THOMOINTERGENIC
SBS  Chr1218907709C-THETINTERGENIC
SBS  Chr1211648761G-AHETINTRON
SBS  Chr1221869721G-THETINTERGENIC
SBS  Chr2504520T-CHOMOINTERGENIC
SBS  Chr213763739T-GHETINTRON
SBS  Chr213575651G-AHETINTRON
SBS  Chr211850975T-AHETINTRON
SBS  Chr33771627C-THETINTERGENIC
SBS  Chr38035214A-CHETINTERGENIC
SBS  Chr414547660G-AHOMOINTERGENIC
SBS  Chr424196461A-THETINTERGENIC
SBS  Chr424056559A-THETINTRON
SBS  Chr57948010A-THETINTERGENIC
SBS  Chr54304973A-GHETINTRON
SBS  Chr53579783C-THETINTERGENIC
SBS  Chr52299136G-CHETINTERGENIC
SBS  Chr615511240C-THOMOINTERGENIC
SBS  Chr620215430C-GHOMOINTRON
SBS  Chr612229043G-AHETINTERGENIC
SBS  Chr922142191A-GHETINTRON
SBS  Chr922777857G-CHETINTERGENIC
SBS  Chr922057607C-THETINTERGENIC
SBS  Chr96321943G-AHOMOINTERGENIC
SBS  Chr91638140A-GHETUTR_3_PRIME
SBS  Chr918842480C-GHETINTERGENIC

Deletions: 20

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr120578827205788314
Deletion  Chr1012300162123001631
Deletion  Chr1112687231126872409
Deletion  Chr234904834906012
Deletion  Chr2413415841341668
Deletion  Chr220577135205771416
Deletion  Chr220597283205972907
Deletion  Chr2465011446501239
Deletion  Chr21236985412394423245694
Deletion  Chr333590039335900456
Deletion  Chr358360015865000290007
Deletion  Chr435455082354550919
Deletion  Chr45610186561020418
Deletion  Chr524330654243306562
Deletion  Chr5540338554033938
Deletion  Chr632600013284000240006
Deletion  Chr727641473276414774LOC_Os07g46350
Deletion  Chr8888963188896343LOC_Os08g14780
Deletion  Chr921938994219390017
Deletion  Chr9221435202214353616

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1944515394451532
Insertion  Chr424511463245114631
Insertion  Chr8905695190569514LOC_Os08g15010
Insertion  Chr917452420174524201

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12502114520116LOC_Os12g01850