Mutant Information 

Mutant NameFN-348  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 27

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr11149429T-AHOMOINTRON
SBS  Chr132952566T-AHETINTERGENIC
SBS  Chr128648649A-GHOMOINTERGENIC
SBS  Chr114395077G-THETINTRON
SBS  Chr110042455A-CHETINTERGENIC
SBS  Chr15424010G-AHETINTERGENIC
SBS  Chr105412339A-GHOMOINTERGENIC
SBS  Chr1020708901C-THETINTERGENIC
SBS  Chr1019854018C-THETUTR_3_PRIME
SBS  Chr106889447A-THETINTERGENIC
SBS  Chr1114235109G-AHOMONON_SYNONYMOUS_CODINGLOC_Os11g24990
SBS  Chr123418560G-THOMOINTERGENIC
SBS  Chr1212642644G-THETNON_SYNONYMOUS_CODINGLOC_Os12g22390
SBS  Chr211442440T-CHETINTERGENIC
SBS  Chr215798582A-THETINTERGENIC
SBS  Chr215798583C-THETINTERGENIC
SBS  Chr230812931C-THOMOINTERGENIC
SBS  Chr336204771A-GHOMONON_SYNONYMOUS_CODINGLOC_Os03g64070
SBS  Chr418159110T-AHOMOINTERGENIC
SBS  Chr512270422C-AHOMOINTERGENIC
SBS  Chr521085116T-AHETINTERGENIC
SBS  Chr64301177A-THETINTERGENIC
SBS  Chr720763869A-CHETINTERGENIC
SBS  Chr821973604A-GHETUTR_3_PRIME
SBS  Chr816684199A-GHETINTERGENIC
SBS  Chr815955390C-THETINTERGENIC
SBS  Chr810158455A-CHOMOINTERGENIC

Deletions: 15

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr10120782101207822111
Deletion  Chr11249509224950986
Deletion  Chr1219514638195146402
Deletion  Chr121330200113341000390005
Deletion  Chr43948906394891812
Deletion  Chr430118885301188872
Deletion  Chr424426485244264861
Deletion  Chr5256294425629451
Deletion  Chr5846000198560001396000221
Deletion  Chr613609166136091671
Deletion  Chr61271237712713358981LOC_Os06g21980
Deletion  Chr715043078150430857
Deletion  Chr8211571842115719713
Deletion  Chr8434933743493403LOC_Os08g07760
Deletion  Chr947330014780000470008

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1111805773118057732
Insertion  Chr218110885181108853
Insertion  Chr519680981196809812

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr121327657513917769LOC_Os12g23480
Inversion  Chr121327657513917769LOC_Os12g24400
Inversion  Chr21144248713825593
Inversion  Chr945773754994590LOC_Os09g09330
Inversion  Chr947797174994608LOC_Os09g09330

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1213538875Chr1023188787LOC_Os10g43040
Translocation  Chr1213539167Chr612712423LOC_Os06g21980
Translocation  Chr1023188699Chr612713356LOC_Os10g43040