Mutant Information 

Mutant NameFN-349  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 32

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr103361766G-AHOMOINTERGENIC
SBS  Chr1110278165G-CHETINTERGENIC
SBS  Chr117462537T-AHETINTERGENIC
SBS  Chr1227446979G-AHOMONON_SYNONYMOUS_CODINGLOC_Os12g44280
SBS  Chr1214304402C-GHETINTERGENIC
SBS  Chr21024109T-CHETINTRON
SBS  Chr226166207T-CHETINTERGENIC
SBS  Chr221438299A-THETINTRON
SBS  Chr220282309T-AHETINTERGENIC
SBS  Chr324164803A-GHETINTERGENIC
SBS  Chr315312227G-THETINTRON
SBS  Chr313330708G-AHOMOINTRON
SBS  Chr333381148A-THETINTERGENIC
SBS  Chr422252478T-AHETINTERGENIC
SBS  Chr433678136T-AHETUTR_3_PRIME
SBS  Chr412992959T-CHETUTR_3_PRIME
SBS  Chr46780736A-GHETNON_SYNONYMOUS_CODINGLOC_Os04g12280
SBS  Chr46780735G-AHETSYNONYMOUS_CODING
SBS  Chr426774497C-THOMOINTERGENIC
SBS  Chr523899631G-AHETUTR_3_PRIME
SBS  Chr54139803C-AHETINTERGENIC
SBS  Chr523899630T-CHETUTR_3_PRIME
SBS  Chr527610556C-THETINTRON
SBS  Chr527732434G-AHETINTERGENIC
SBS  Chr610146362C-THOMOINTERGENIC
SBS  Chr65999667A-GHETINTERGENIC
SBS  Chr625347189A-GHOMOUTR_3_PRIME
SBS  Chr621946652A-GHOMOINTERGENIC
SBS  Chr610690790C-AHETUTR_3_PRIME
SBS  Chr78134420C-THETINTERGENIC
SBS  Chr75686849C-THETINTERGENIC
SBS  Chr92238758A-THETSTOP_GAINEDLOC_Os09g04240

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr114205679142056801
Deletion  Chr125698443256984441
Deletion  Chr102064431206447948
Deletion  Chr111160400111658000540005
Deletion  Chr1226253515262535161
Deletion  Chr326695455266954561
Deletion  Chr335698195356981994LOC_Os03g63150
Deletion  Chr426362236263622437
Deletion  Chr527230001272680003800025
Deletion  Chr518258529182585367
Deletion  Chr56196119619616243
Deletion  Chr517547663175476641LOC_Os05g30280
Deletion  Chr527419752274237784026LOC_Os05g47840
Deletion  Chr6294652482946526618LOC_Os06g48700
Deletion  Chr7136759331367594613LOC_Os07g24110
Deletion  Chr9598523159852321
Deletion  Chr989649789651013

Inversions: 6

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr111157547911604121
Inversion  Chr111157549111657977
Inversion  Chr43337938033771830LOC_Os04g56050
Inversion  Chr43337938033771830LOC_Os04g56630
Inversion  Chr973974428732074
Inversion  Chr973974658732092

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr920528295Chr713675115LOC_Os07g24110
Translocation  Chr920529036Chr7134042462
Translocation  Chr527242578Chr4337718412
Translocation  Chr527245942Chr4333793712