Mutant Information 

Mutant NameFN-350  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 35

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr15047925T-AHETINTERGENIC
SBS  Chr16870862T-CHOMOINTERGENIC
SBS  Chr117825885C-THETSYNONYMOUS_CODING
SBS  Chr136048549G-CHETINTERGENIC
SBS  Chr1019664550G-THETINTERGENIC
SBS  Chr1120148826C-AHOMOINTRON
SBS  Chr125308018G-AHETINTERGENIC
SBS  Chr1212115950C-THETSTOP_GAINEDLOC_Os12g21550
SBS  Chr1219732957C-AHETNON_SYNONYMOUS_CODINGLOC_Os12g32680
SBS  Chr1222130043T-CHETINTRON
SBS  Chr1223018948G-AHETINTERGENIC
SBS  Chr22864552T-AHOMOINTERGENIC
SBS  Chr22864551G-AHOMOINTERGENIC
SBS  Chr22864550G-AHOMOINTERGENIC
SBS  Chr22864438G-AHOMOSYNONYMOUS_CODING
SBS  Chr34253197C-AHETINTERGENIC
SBS  Chr31349274A-CHETINTRON
SBS  Chr331902772C-THETINTERGENIC
SBS  Chr413049966G-CHETSTOP_GAINEDLOC_Os04g22990
SBS  Chr628492082C-THOMOINTERGENIC
SBS  Chr617364850G-AHETINTERGENIC
SBS  Chr610072266A-GHETNON_SYNONYMOUS_CODINGLOC_Os06g17380
SBS  Chr68706715G-CHETUTR_3_PRIME
SBS  Chr79493257T-AHETINTERGENIC
SBS  Chr76610188G-AHETINTERGENIC
SBS  Chr726564418T-GHOMOINTERGENIC
SBS  Chr727266699G-AHOMOINTERGENIC
SBS  Chr727266704A-CHOMOINTERGENIC
SBS  Chr825324899T-GHOMOINTRON
SBS  Chr82156605C-THETSYNONYMOUS_CODING
SBS  Chr89017439G-AHETNON_SYNONYMOUS_CODINGLOC_Os08g14950
SBS  Chr915696270G-AHOMOINTERGENIC
SBS  Chr910204571G-AHOMONON_SYNONYMOUS_CODINGLOC_Os09g16650
SBS  Chr92323845C-THOMOINTERGENIC
SBS  Chr9349097T-AHETINTRON

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr118888056188880604
Deletion  Chr136467358364673602LOC_Os01g62945
Deletion  Chr129573179295731878
Deletion  Chr117385091173851009
Deletion  Chr1349460013511600017000029
Deletion  Chr1351190013537700025800037
Deletion  Chr1148860011508700020100027
Deletion  Chr168780106878350340
Deletion  Chr1560451256045164
Deletion  Chr125694640256946411
Deletion  Chr11720004372000441
Deletion  Chr12148283841482840824
Deletion  Chr12284749328474941
Deletion  Chr318505552185055531
Deletion  Chr526607580266075811
Deletion  Chr612112587121125892
Deletion  Chr6872618287261886
Deletion  Chr616512305165123149
Deletion  Chr710278920102789211
Deletion  Chr725770123257701241
Deletion  Chr728847980288479877
Deletion  Chr9211333872113339912LOC_Os09g36619

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1211303223113032231
Insertion  Chr3161873016187301
Insertion  Chr328227423282274231

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr71421194514228350LOC_Os07g24990

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1111518953Chr433507560
Translocation  Chr433507554Chr135377049LOC_Os01g61110