Mutant Information 

Mutant NameFN-356  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr130062284G-THOMOINTERGENIC
SBS  Chr135076899G-CHOMOINTERGENIC
SBS  Chr136029134A-THETINTERGENIC
SBS  Chr109828687C-THETINTRON
SBS  Chr1010084012C-THETINTERGENIC
SBS  Chr1013689192G-AHETINTERGENIC
SBS  Chr1115424919C-THETINTERGENIC
SBS  Chr1121321827G-AHETINTERGENIC
SBS  Chr12718958G-AHETSYNONYMOUS_CODING
SBS  Chr12718963G-AHETNON_SYNONYMOUS_CODINGLOC_Os12g02280
SBS  Chr1224491887G-AHOMOINTERGENIC
SBS  Chr1224491888C-AHOMOINTERGENIC
SBS  Chr29689239G-AHETINTERGENIC
SBS  Chr220491443C-GHETSYNONYMOUS_CODING
SBS  Chr39256899A-THETINTERGENIC
SBS  Chr311529530G-THETINTRON
SBS  Chr315299632T-AHETINTERGENIC
SBS  Chr325129083A-GHETINTRON
SBS  Chr410542632T-CHETSYNONYMOUS_CODING
SBS  Chr525730800A-GHETINTERGENIC
SBS  Chr517441827C-THETUTR_3_PRIME
SBS  Chr523308557A-THETINTERGENIC
SBS  Chr528350929G-THETINTERGENIC
SBS  Chr628336196G-CHETINTRON
SBS  Chr628330871A-GHETINTERGENIC
SBS  Chr610685970T-GHOMONON_SYNONYMOUS_CODINGLOC_Os06g18820
SBS  Chr714927239T-AHOMOINTRON
SBS  Chr712316714C-THETNON_SYNONYMOUS_CODINGLOC_Os07g22024
SBS  Chr813146485C-THETINTRON

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr119553216195532248
Deletion  Chr139197105391971127
Deletion  Chr1017599203175992063
Deletion  Chr112547166254718216
Deletion  Chr12132851251328513510
Deletion  Chr310716013107160141
Deletion  Chr533402763340784508
Deletion  Chr62121364212137612
Deletion  Chr6301709673017102255
Deletion  Chr719654864196548695LOC_Os07g32870
Deletion  Chr72170000121721000210003
Deletion  Chr715432124154321262

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr6753017575301751
Insertion  Chr625246934252469342

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr52265327923323027
Inversion  Chr52265329923323026

Translocations: 6

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr916331089Chr29957872LOC_Os09g26880
Translocation  Chr819611798Chr53340784LOC_Os08g31660
Translocation  Chr819611801Chr53340292LOC_Os08g31660
Translocation  Chr721720520Chr521789810
Translocation  Chr721744560Chr314358084LOC_Os03g25130
Translocation  Chr521793853Chr314358086LOC_Os03g25130