Mutant Information 

Mutant NameFN-36  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 14

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1012147404C-THomoINTRON
SBS  Chr1215943162T-GHomoINTERGENIC
SBS  Chr26437783T-GHomoINTRON
SBS  Chr329419488C-AHomoINTERGENIC
SBS  Chr420648675G-THomoINTERGENIC
SBS  Chr529318596T-CHomoSYNONYMOUS_CODING
SBS  Chr725498438C-AHomoINTERGENIC
SBS  Chr725498437C-AHomoINTERGENIC
SBS  Chr721461588T-AHomoINTERGENIC
SBS  Chr721267579G-THomoNON_SYNONYMOUS_CODINGLOC_Os07g35540
SBS  Chr819842948T-AHomoINTRON
SBS  Chr94893608C-THomoINTERGENIC
SBS  Chr912576495G-AHomoINTERGENIC
SBS  Chr912883502A-GHomoINTERGENIC

Deletions: 14

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr114678069146780701
Deletion  Chr1316036273160368659
Deletion  Chr13699655036997103553
Deletion  Chr142191599421916045
Deletion  Chr11252612432526126219
Deletion  Chr225589542255895431
Deletion  Chr226043189260431901
Deletion  Chr39621495962150813
Deletion  Chr415321699153217045
Deletion  Chr56963600696364444LOC_Os05g12170
Deletion  Chr640920014140000480005
Deletion  Chr9125756981257576062
Deletion  Chr9135849013584944LOC_Os09g02900
Deletion  Chr9175078231750783512LOC_Os09g28830

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr225802604258026041
Insertion  Chr7686689868668981
Insertion  Chr9693770869377081

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr108386442Chr529285957LOC_Os05g51020
Translocation  Chr108391661Chr529285943LOC_Os05g51020