Mutant Information 

Mutant NameFN-364  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 17

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr136350361C-THETINTERGENIC
SBS  Chr1020448761C-THETINTERGENIC
SBS  Chr1011242544C-THETINTERGENIC
SBS  Chr115011551C-AHETINTRON
SBS  Chr1213046421T-AHETINTERGENIC
SBS  Chr216242572A-GHETINTERGENIC
SBS  Chr320141029C-THETINTRON
SBS  Chr44236772A-GHETINTRON
SBS  Chr58331405T-AHOMOINTERGENIC
SBS  Chr58331406T-AHOMOINTERGENIC
SBS  Chr510162649C-THOMOINTERGENIC
SBS  Chr51431902A-GHETINTRON
SBS  Chr629578249C-THOMOSYNONYMOUS_CODING
SBS  Chr728437879A-THETINTERGENIC
SBS  Chr714708065G-AHOMONON_SYNONYMOUS_CODINGLOC_Os07g25650
SBS  Chr815963585G-AHOMOINTERGENIC
SBS  Chr83627848C-THETINTERGENIC

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1105121510512238
Deletion  Chr10104306021043061412LOC_Os10g20650
Deletion  Chr1213627158136271591LOC_Os12g23980
Deletion  Chr211439176114391793
Deletion  Chr292325792326710LOC_Os02g02540
Deletion  Chr4311214563112147115
Deletion  Chr522272296222723059
Deletion  Chr6150009031500092017
Deletion  Chr7846672584667294
Deletion  Chr7847848184784865
Deletion  Chr728436430284364366LOC_Os07g47540
Deletion  Chr817493353174933541LOC_Os08g28630

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr314295398142953982
Insertion  Chr815507494155074941
Insertion  Chr826409560264095601

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr121303426913046787
Inversion  Chr121321221813442838LOC_Os12g23690
Inversion  Chr62894949129167679LOC_Os06g47830
Inversion  Chr62894997129167692LOC_Os06g47830

Translocations: 6

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr114913538Chr1017379131
Translocation  Chr115381957Chr1021906940LOC_Os11g10050
Translocation  Chr115480010Chr6289495042
Translocation  Chr115480011Chr1017379571LOC_Os11g10130
Translocation  Chr1222633754Chr115381971LOC_Os11g10050
Translocation  Chr1222633779Chr628949942LOC_Os06g47830