Mutant Information 

Mutant NameFN-37  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 15

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr135945474G-AHomoNON_SYNONYMOUS_CODINGLOC_Os01g62100
SBS  Chr1121857700G-AHomoINTERGENIC
SBS  Chr1120783228T-AHomoINTERGENIC
SBS  Chr1116617092C-GHomoINTRON
SBS  Chr115439090T-CHomoINTERGENIC
SBS  Chr1122265055G-THomoINTRON
SBS  Chr224008839T-AHomoINTERGENIC
SBS  Chr219289974T-CHomoINTERGENIC
SBS  Chr427786593A-GHomoINTRON
SBS  Chr427441010G-THomoINTERGENIC
SBS  Chr53705063C-THomoSYNONYMOUS_CODING
SBS  Chr53705062T-AHomoSTOP_GAINEDLOC_Os05g07050
SBS  Chr511611044T-CHomoINTRON
SBS  Chr63457562T-AHomoINTERGENIC
SBS  Chr810770418A-GHomoNON_SYNONYMOUS_CODINGLOC_Os08g17610

Deletions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1265420016614000720009
Deletion  Chr620279163202791652
Deletion  Chr91280800112832000240005

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1265422896820836
Inversion  Chr1266136106820846LOC_Os12g12080
Inversion  Chr82119832421273238LOC_Os08g33860
Inversion  Chr82119832421273238LOC_Os08g33980

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr912828440Chr821273091