Mutant Information 

Mutant NameFN-372  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 18

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr111789382C-THOMOINTERGENIC
SBS  Chr1014104661T-AHOMOINTERGENIC
SBS  Chr118087822G-AHOMOINTERGENIC
SBS  Chr11404189G-THETINTRON
SBS  Chr1128967956G-AHETINTERGENIC
SBS  Chr32893819G-AHETINTERGENIC
SBS  Chr310226047G-CHETINTERGENIC
SBS  Chr316310635T-GHETINTERGENIC
SBS  Chr431025460T-GHOMOINTERGENIC
SBS  Chr431025461T-CHOMOINTERGENIC
SBS  Chr430851457G-AHOMOINTERGENIC
SBS  Chr63766567T-GHETINTRON
SBS  Chr628640897T-AHOMOINTRON
SBS  Chr729056836C-THETINTERGENIC
SBS  Chr79755340G-THETINTERGENIC
SBS  Chr79746344A-GHETINTRON
SBS  Chr913938409A-THETINTERGENIC
SBS  Chr913938408C-THETINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1304466813044670726
Deletion  Chr129469437294694381
Deletion  Chr1120565076205650815
Deletion  Chr1111047164110471651
Deletion  Chr11364273136427354
Deletion  Chr227878518278785268
Deletion  Chr2172540271725404720
Deletion  Chr2980254998025578
Deletion  Chr217484826174848282
Deletion  Chr332832113328321218LOC_Os03g57580
Deletion  Chr312475254124752562
Deletion  Chr5767155576715594
Deletion  Chr625916433259164341
Deletion  Chr624199638241996391
Deletion  Chr710147005101470149
Deletion  Chr715614428156144302
Deletion  Chr9867341086734122LOC_Os09g14620

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr2891803889180381
Insertion  Chr2164792311647923112
Insertion  Chr329811843298118431
Insertion  Chr427654570276545701
Insertion  Chr521286688212866882

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr48638861715573LOC_Os04g03810
Inversion  Chr417155744509894LOC_Os04g03810
Inversion  Chr417155744509894LOC_Os04g08410