Mutant Information 

Mutant NameFN-375  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr122762748A-GHETINTERGENIC
SBS  Chr132747160T-CHOMOINTERGENIC
SBS  Chr135114455G-AHETINTERGENIC
SBS  Chr10299975A-GHOMOINTERGENIC
SBS  Chr106469053T-AHETINTERGENIC
SBS  Chr1012313530C-THOMOINTERGENIC
SBS  Chr1015650359G-CHETNON_SYNONYMOUS_CODINGLOC_Os10g30130
SBS  Chr116512153C-GHETINTERGENIC
SBS  Chr119070217G-AHETINTERGENIC
SBS  Chr1110767908G-AHOMOINTERGENIC
SBS  Chr227791562C-THETINTRON
SBS  Chr224237891T-CHETINTRON
SBS  Chr215637032A-THOMOSTOP_GAINEDLOC_Os02g26630
SBS  Chr215509351T-CHETINTERGENIC
SBS  Chr214847043T-CHOMOINTRON
SBS  Chr34596525G-AHETINTRON
SBS  Chr321302434A-CHETNON_SYNONYMOUS_CODINGLOC_Os03g38370
SBS  Chr428853184G-AHETINTERGENIC
SBS  Chr416439510A-THETINTERGENIC
SBS  Chr413696780C-THETINTERGENIC
SBS  Chr410158900C-THETINTERGENIC
SBS  Chr48670056T-CHETINTERGENIC
SBS  Chr48028897G-AHETINTERGENIC
SBS  Chr522136348C-THETINTERGENIC
SBS  Chr527734824G-CHETINTRON
SBS  Chr5605537T-CHOMOINTERGENIC
SBS  Chr616917794T-AHETINTERGENIC
SBS  Chr614631535G-AHETINTERGENIC
SBS  Chr616641227G-CHETINTRON
SBS  Chr628652403G-CHOMONON_SYNONYMOUS_CODINGLOC_Os06g47260
SBS  Chr721074379C-THOMOINTRON
SBS  Chr811860590G-AHETINTRON
SBS  Chr82246885T-CHETINTERGENIC

Deletions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr103971571397158615
Deletion  Chr1114872773148727752
Deletion  Chr11919678891967913LOC_Os11g16590
Deletion  Chr2201171572011716710
Deletion  Chr320138204201382051
Deletion  Chr3459184045918488
Deletion  Chr3418715641871659LOC_Os03g08220
Deletion  Chr41240700113296000889000131
Deletion  Chr430831199308312001
Deletion  Chr5325809032580911
Deletion  Chr5670224267022453LOC_Os05g11790
Deletion  Chr629660403296604085
Deletion  Chr6119480831194809310
Deletion  Chr79504001963300012900012
Deletion  Chr8430270543027138
Deletion  Chr810552715105527172
Deletion  Chr8618948961894901
Deletion  Chr8217580642175809834LOC_Os08g34640
Deletion  Chr91418812514188796671LOC_Os09g23810
Deletion  Chr916035234160352428LOC_Os09g26530
Deletion  Chr9154621261546213711

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr129322201293222011
Insertion  Chr11268773926877391LOC_Os11g05800
Insertion  Chr513981567139815671

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1722919133506545LOC_Os01g57960
Inversion  Chr794524249633215

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1111666687Chr2242390622
Translocation  Chr511975318Chr215223007
Translocation  Chr918841267Chr614756631