Mutant Information 

Mutant NameFN-379  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 28

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr16504043T-CHOMONON_SYNONYMOUS_CODINGLOC_Os01g11946
SBS  Chr140772804T-AHOMOINTERGENIC
SBS  Chr131046221G-AHOMOINTERGENIC
SBS  Chr118872575C-THETINTERGENIC
SBS  Chr114514088T-CHETINTRON
SBS  Chr110403381C-AHETINTRON
SBS  Chr110149735T-CHETINTRON
SBS  Chr104490047G-CHETINTERGENIC
SBS  Chr1218095025G-AHOMOINTERGENIC
SBS  Chr1213611880C-THETINTERGENIC
SBS  Chr125187843C-AHETINTERGENIC
SBS  Chr1222937489C-THETINTERGENIC
SBS  Chr234234385C-AHETINTERGENIC
SBS  Chr320012936C-THOMOINTERGENIC
SBS  Chr334765646A-THOMOINTERGENIC
SBS  Chr429646276C-THOMOINTERGENIC
SBS  Chr432705455G-THOMOINTERGENIC
SBS  Chr429646275G-THOMOINTERGENIC
SBS  Chr48974886G-AHETNON_SYNONYMOUS_CODINGLOC_Os04g16510
SBS  Chr64917868A-THETINTERGENIC
SBS  Chr728002985T-CHOMOINTRON
SBS  Chr711406390C-GHETSYNONYMOUS_CODING
SBS  Chr711081193C-THETINTERGENIC
SBS  Chr83560233C-AHETINTERGENIC
SBS  Chr83560232C-THETINTERGENIC
SBS  Chr825772552T-GHETINTERGENIC
SBS  Chr91128895A-GHETINTERGENIC
SBS  Chr94474755T-CHETINTERGENIC

Deletions: 6

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr122430383224303841LOC_Os01g39770
Deletion  Chr11982449798244981
Deletion  Chr22751100127547000360004
Deletion  Chr333162347331623569
Deletion  Chr423426828234268324
Deletion  Chr51821001198700016600032

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1213611865136118652

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12545850825698393LOC_Os01g45274

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr51986744Chr1309955812
Translocation  Chr327483899Chr130002618
Translocation  Chr332204940Chr1299982672