Mutant Information 

Mutant NameFN-380  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 26

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr15387588G-CHETSYNONYMOUS_CODING
SBS  Chr141638570C-GHETINTERGENIC
SBS  Chr131929467G-CHETINTRON
SBS  Chr131514168T-AHETINTRON
SBS  Chr129200734C-THETINTERGENIC
SBS  Chr123958307A-GHETINTRON
SBS  Chr18381621G-AHOMOINTERGENIC
SBS  Chr1017037626T-CHETINTERGENIC
SBS  Chr1015824395T-AHETINTERGENIC
SBS  Chr1112926799T-AHETINTERGENIC
SBS  Chr115869680G-THETINTERGENIC
SBS  Chr11738421G-AHOMOINTRON
SBS  Chr128283778T-AHETNON_SYNONYMOUS_CODINGLOC_Os12g14510
SBS  Chr1210663694C-THETINTERGENIC
SBS  Chr28506439C-THOMOINTERGENIC
SBS  Chr231013136C-THOMONON_SYNONYMOUS_CODINGLOC_Os02g50790
SBS  Chr323320938A-THOMOSTOP_GAINEDLOC_Os03g41970
SBS  Chr43208522G-CHOMOINTERGENIC
SBS  Chr41900901C-THETNON_SYNONYMOUS_CODINGLOC_Os04g04120
SBS  Chr430772519G-AHOMOINTERGENIC
SBS  Chr729237236A-GHOMOINTERGENIC
SBS  Chr729485421A-THOMONON_SYNONYMOUS_CODINGLOC_Os07g49240
SBS  Chr714513428T-CHETINTERGENIC
SBS  Chr821731931C-AHETINTERGENIC
SBS  Chr815349458G-AHOMOINTERGENIC
SBS  Chr98218534G-AHETINTERGENIC

Deletions: 10

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr114038629140386378LOC_Os01g24920
Deletion  Chr1786564278656431
Deletion  Chr137191071371910721
Deletion  Chr113545953546005LOC_Os11g01600
Deletion  Chr1121726594217265973
Deletion  Chr323320941233209432LOC_Os03g41970
Deletion  Chr331563162315631642
Deletion  Chr5128968751289688510LOC_Os05g22730
Deletion  Chr624091399240914045LOC_Os06g40450
Deletion  Chr6876839087683977

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr266888347075155
Inversion  Chr41283665312948663LOC_Os04g22850
Inversion  Chr41283667312948663LOC_Os04g22850
Inversion  Chr41716167317357886
Inversion  Chr41716376017357894

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr119523096Chr8129105962
Translocation  Chr317895964Chr1772701LOC_Os01g02400
Translocation  Chr317896208Chr1772745LOC_Os01g02400