Mutant Information 

Mutant NameFN-381  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 27

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr129014937A-GHETINTERGENIC
SBS  Chr142310075C-THETNON_SYNONYMOUS_CODINGLOC_Os01g72940
SBS  Chr106064492C-THETINTERGENIC
SBS  Chr109980098A-GHOMOINTERGENIC
SBS  Chr1011711318T-AHOMOINTRON
SBS  Chr1018571213A-THOMOINTERGENIC
SBS  Chr113658294G-AHOMONON_SYNONYMOUS_CODINGLOC_Os11g07260
SBS  Chr115922840T-AHOMOINTRON
SBS  Chr127667731T-AHETINTRON
SBS  Chr127667732T-AHETINTRON
SBS  Chr220526845G-THETNON_SYNONYMOUS_CODINGLOC_Os02g34300
SBS  Chr22126247T-AHETINTRON
SBS  Chr325475000G-CHETINTERGENIC
SBS  Chr314741045G-THETINTRON
SBS  Chr423553982G-THETUTR_3_PRIME
SBS  Chr418933376T-GHOMOINTERGENIC
SBS  Chr426345215T-CHETINTERGENIC
SBS  Chr426114353T-AHETINTERGENIC
SBS  Chr428160486T-AHETINTERGENIC
SBS  Chr428160485T-AHETINTERGENIC
SBS  Chr423553981A-THETUTR_3_PRIME
SBS  Chr515812041C-THETNON_SYNONYMOUS_CODINGLOC_Os05g27180
SBS  Chr725900313C-AHOMOINTERGENIC
SBS  Chr713354395A-THOMOUTR_3_PRIME
SBS  Chr712499663C-THOMOINTERGENIC
SBS  Chr915478088T-CHOMOINTERGENIC
SBS  Chr916326084A-GHOMOUTR_5_PRIME

Deletions: 11

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr122735318227353268
Deletion  Chr140107058401070602LOC_Os01g69030
Deletion  Chr1014522068145220779
Deletion  Chr1276830017722000390005
Deletion  Chr331104245311042483
Deletion  Chr329664225296642261
Deletion  Chr4172047117204743
Deletion  Chr4564019556402016LOC_Os04g10400
Deletion  Chr4211960012136900017300024
Deletion  Chr8134778291347784415
Deletion  Chr94472001457500010300012

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr65755715755712

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr127682620Chr310216149LOC_Os12g13660
Translocation  Chr917343292Chr425855951LOC_Os04g43690
Translocation  Chr917350782Chr425889122LOC_Os09g28520