Mutant Information 

Mutant NameFN-384  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 21

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1018124939C-THETINTERGENIC
SBS  Chr1013113292A-GHOMONON_SYNONYMOUS_CODINGLOC_Os10g25360
SBS  Chr112948812G-THETINTERGENIC
SBS  Chr1226454689A-THETINTERGENIC
SBS  Chr123354296T-AHETINTERGENIC
SBS  Chr212917374C-AHETINTRON
SBS  Chr218775798G-THETNON_SYNONYMOUS_CODINGLOC_Os02g31290
SBS  Chr232317254G-AHETINTERGENIC
SBS  Chr323864713G-AHETINTERGENIC
SBS  Chr411873591A-CHETINTRON
SBS  Chr45779876T-AHETINTERGENIC
SBS  Chr513800507G-AHETINTERGENIC
SBS  Chr524689804G-AHETINTERGENIC
SBS  Chr526904105C-THOMOSYNONYMOUS_CODING
SBS  Chr66635393C-THOMOINTERGENIC
SBS  Chr61340269A-THOMOINTERGENIC
SBS  Chr726068810T-AHOMOINTERGENIC
SBS  Chr720333955C-THETINTERGENIC
SBS  Chr88980280A-THETINTERGENIC
SBS  Chr88357033C-THETINTRON
SBS  Chr92112488A-GHETINTERGENIC

Deletions: 11

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1167361116736176LOC_Os01g03914
Deletion  Chr1013113295131132983LOC_Os10g25360
Deletion  Chr1122119204221192062
Deletion  Chr1221216087212160925
Deletion  Chr23566683356669512LOC_Os02g06990
Deletion  Chr521630197216301992
Deletion  Chr6128974912897523LOC_Os06g03380
Deletion  Chr7129802191298024223
Deletion  Chr822884306228843148
Deletion  Chr9165105316510574
Deletion  Chr912412212124122164

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr328519382285193822
Insertion  Chr428552488285524884
Insertion  Chr626733349267333491
Insertion  Chr7609838960983891

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr71016025013032794LOC_Os07g23110
Inversion  Chr71303280114336807LOC_Os07g23110
Inversion  Chr71303280114336807LOC_Os07g25100