Mutant Information 

Mutant NameFN-386  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 20

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr127742150C-THOMOINTERGENIC
SBS  Chr1018901630A-GHETINTRON
SBS  Chr112813867T-CHETINTERGENIC
SBS  Chr1110667584G-AHETSTOP_GAINEDLOC_Os11g18790
SBS  Chr221539301T-CHOMOINTERGENIC
SBS  Chr325300266A-CHETINTRON
SBS  Chr426523671G-AHETINTERGENIC
SBS  Chr432833542C-GHETINTERGENIC
SBS  Chr435189879G-AHETINTERGENIC
SBS  Chr411267763T-AHOMOUTR_5_PRIME
SBS  Chr510075010C-THETSYNONYMOUS_CODING
SBS  Chr516001062A-GHETINTERGENIC
SBS  Chr623105222T-AHETINTERGENIC
SBS  Chr714013198A-GHOMONON_SYNONYMOUS_CODINGLOC_Os07g24630
SBS  Chr77056838C-THETINTERGENIC
SBS  Chr76958744C-THOMOINTRON
SBS  Chr99236679G-CHETINTERGENIC
SBS  Chr915456599T-AHETINTERGENIC
SBS  Chr917283585G-AHETINTERGENIC
SBS  Chr920782200G-AHOMONON_SYNONYMOUS_CODINGLOC_Os09g36090

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr137838503378385063
Deletion  Chr10712311071231122
Deletion  Chr1119339020193390244
Deletion  Chr1128969348289693513
Deletion  Chr1111969024119690251LOC_Os11g20650
Deletion  Chr27621968762199022LOC_Os02g13970
Deletion  Chr2736132773613347
Deletion  Chr21381084138109511LOC_Os02g03400
Deletion  Chr320304001204030009900015
Deletion  Chr3203665492036656112
Deletion  Chr433707046337070548LOC_Os04g56520
Deletion  Chr422558145225620753930LOC_Os04g37930
Deletion  Chr5215619702156199323
Deletion  Chr517537745175377461LOC_Os05g30260
Deletion  Chr6831428683142915LOC_Os06g14740
Deletion  Chr6560850256085042LOC_Os06g10740
Deletion  Chr8797393779739392
Deletion  Chr915466404154664117

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1216737096167370961
Insertion  Chr5651454165145411
Insertion  Chr6446467844646784

Inversions: 7

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr101022119910263823LOC_Os10g20410
Inversion  Chr31706220720402810LOC_Os03g29940
Inversion  Chr32012950020303333LOC_Os03g36290
Inversion  Chr52754671924998LOC_Os05g01470
Inversion  Chr52754671924998LOC_Os05g04220
Inversion  Chr52754811924994LOC_Os05g01470
Inversion  Chr52754811924994LOC_Os05g04220