Mutant Information 

Mutant NameFN-388  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 15

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr124356291G-AHOMOINTRON
SBS  Chr111326936A-THETNON_SYNONYMOUS_CODINGLOC_Os11g03460
SBS  Chr111340386A-GHETINTRON
SBS  Chr210058100C-GHOMOINTERGENIC
SBS  Chr29654822G-AHETNON_SYNONYMOUS_CODINGLOC_Os02g16940
SBS  Chr38628086G-AHETINTRON
SBS  Chr41788479A-GHETINTERGENIC
SBS  Chr413820592G-CHETINTERGENIC
SBS  Chr424148717G-AHETINTERGENIC
SBS  Chr612318935G-THOMONON_SYNONYMOUS_CODINGLOC_Os06g21330
SBS  Chr718984209A-THOMOINTERGENIC
SBS  Chr726385510G-THOMOINTERGENIC
SBS  Chr726849869T-CHOMOUTR_3_PRIME
SBS  Chr7836258C-THOMOINTERGENIC
SBS  Chr76177767C-THETINTRON

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr141179307411793081
Deletion  Chr1119230011204300012000016
Deletion  Chr1114852607148526092
Deletion  Chr113949897394993134
Deletion  Chr1114014889140148978LOC_Os11g24560
Deletion  Chr12258198312581984211
Deletion  Chr12127796081277961810LOC_Os12g22610
Deletion  Chr314331463143314718LOC_Os03g25100
Deletion  Chr410461367104613725
Deletion  Chr517630441176304421
Deletion  Chr6116510411165105918
Deletion  Chr6173304521733217117192
Deletion  Chr726378796263787993
Deletion  Chr8984077998407812
Deletion  Chr813116683131166841
Deletion  Chr913316758133167591

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr122497006224970061

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr111001540510020534
Inversion  Chr41722856318029006LOC_Os04g30210
Inversion  Chr685197848688232LOC_Os06g15310
Inversion  Chr685197988693373