Mutant Information 

Mutant NameFN-39  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability No


Variant Information 

Single base substitutions: 8

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr112766663C-THomoNON_SYNONYMOUS_CODINGLOC_Os01g22720
SBS  Chr1110156519G-AHomoINTERGENIC
SBS  Chr1122538288C-THomoUTR_3_PRIME
SBS  Chr316078521G-AHomoSYNONYMOUS_CODING
SBS  Chr331983854A-THomoINTERGENIC
SBS  Chr723418422T-AHomoINTERGENIC
SBS  Chr93787531A-GHomoINTERGENIC
SBS  Chr916964019A-GHomoNON_SYNONYMOUS_CODINGLOC_Os09g27900

Deletions: 8

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr134531852345318575LOC_Os01g59690
Deletion  Chr1125676238256762446LOC_Os11g42640
Deletion  Chr11516811251681219
Deletion  Chr1222541830225418366
Deletion  Chr211806926118069304
Deletion  Chr3969985896998624LOC_Os03g17432
Deletion  Chr34466001492000045400070
Deletion  Chr4805475380547585

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11644375026939138