Mutant Information 

Mutant NameFN-4  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 9

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1114194469C-AHomoINTERGENIC
SBS  Chr1120353696C-THomoINTERGENIC
SBS  Chr1213429451C-THomoNON_SYNONYMOUS_CODINGLOC_Os12g23660
SBS  Chr1224357293C-GHomoINTERGENIC
SBS  Chr1224947361G-AHomoNON_SYNONYMOUS_CODINGLOC_Os12g40279
SBS  Chr42841697A-GHomoINTERGENIC
SBS  Chr44979583G-AHETINTRON
SBS  Chr56820653A-THomoINTERGENIC
SBS  Chr817213482A-GHomoINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr135191370351913711
Deletion  Chr1551117455111773LOC_Os01g10450
Deletion  Chr1227480012285500010700016
Deletion  Chr10932006393200652
Deletion  Chr11945140394514041
Deletion  Chr1113549002135490119
Deletion  Chr1217981599179816001
Deletion  Chr211589164115891662
Deletion  Chr2346423933464240310
Deletion  Chr2172700661727009226
Deletion  Chr35763065763093
Deletion  Chr316179461161794709
Deletion  Chr418638166186381671
Deletion  Chr4498018649801871LOC_Os04g09360
Deletion  Chr5262436662624369024
Deletion  Chr623288961232889621
Deletion  Chr821342872213428775

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr3727985872798581
Insertion  Chr422388098223880981

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr2693822012334028
Inversion  Chr354395358436014LOC_Os03g10640
Inversion  Chr354395358436014LOC_Os03g15420

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr121242386Chr14432242
Translocation  Chr121243261Chr14432152