Mutant Information 

Mutant NameFN-40  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 11

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr124007303T-GHomoINTERGENIC
SBS  Chr1016707158A-CHomoINTRON
SBS  Chr1010423502A-CHomoINTERGENIC
SBS  Chr1115707972A-CHomoINTRON
SBS  Chr1112737004C-THomoNON_SYNONYMOUS_CODINGLOC_Os11g22190
SBS  Chr124900766G-AHomoINTERGENIC
SBS  Chr35386492C-AHomoINTRON
SBS  Chr58654875C-THomoINTERGENIC
SBS  Chr53806895T-AHomoINTERGENIC
SBS  Chr610484939T-AHomoINTERGENIC
SBS  Chr93069544G-AHomoSYNONYMOUS_CODING

Deletions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr133369534333695351LOC_Os01g57720
Deletion  Chr124841966248419671
Deletion  Chr218699672186996753
Deletion  Chr231506528315065302
Deletion  Chr8168608316860841

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr131479258314792582

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11668587018886849LOC_Os01g29780
Inversion  Chr88748461665680

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr8892716Chr53806720
Translocation  Chr8892723Chr72716660
Translocation  Chr95758251Chr81685876
Translocation  Chr95758572Chr72769711LOC_Os07g05750