Mutant Information 

Mutant NameFN-42  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 13

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr110387331C-THomoINTRON
SBS  Chr138236873C-THomoINTRON
SBS  Chr138236874C-THomoINTRON
SBS  Chr118168008G-THomoINTRON
SBS  Chr311894500G-THomoUTR_3_PRIME
SBS  Chr517458875C-THomoINTERGENIC
SBS  Chr517458888A-THomoINTERGENIC
SBS  Chr518001606T-CHomoINTERGENIC
SBS  Chr613782336G-AHomoINTERGENIC
SBS  Chr77296632C-THomoINTERGENIC
SBS  Chr77823510G-AHomoINTRON
SBS  Chr711710457A-GHomoINTERGENIC
SBS  Chr726920815A-GHomoINTRON

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr121562569215625712
Deletion  Chr132640841326408498
Deletion  Chr1121492774214927773LOC_Os11g36450
Deletion  Chr1227349721273497265
Deletion  Chr2225446102254463121
Deletion  Chr323452805234528083
Deletion  Chr424809973248099763
Deletion  Chr6268837632688377411
Deletion  Chr723583023235830252LOC_Os07g39350
Deletion  Chr7264530812645309110
Deletion  Chr9127027012702711
Deletion  Chr99744476974448711

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1021290161212901611
Insertion  Chr233662626336626261
Insertion  Chr529569938295699382
Insertion  Chr631125907311259071

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr72318110523654812LOC_Os07g38590
Inversion  Chr72318110523654812LOC_Os07g39480
Inversion  Chr72318112323654983LOC_Os07g38590
Inversion  Chr72318112323654983LOC_Os07g39480